RNA–Protein interactions for RNA: ENST00000464612.5

SNHG12-204, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-204ENST00000464612 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
SNHG12-204ENST00000464612 CCDC180Q9P1Z9 1646 aa19.15■□□□□ 0.66
SNHG12-204ENST00000464612 ABCC9O60706 1549 aa18.69■□□□□ 0.58
SNHG12-204ENST00000464612 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
SNHG12-204ENST00000464612 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
SNHG12-204ENST00000464612 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
SNHG12-204ENST00000464612 NACADO15069 1562 aa17.97■□□□□ 0.47
SNHG12-204ENST00000464612 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
SNHG12-204ENST00000464612 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
SNHG12-204ENST00000464612 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
SNHG12-204ENST00000464612 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
SNHG12-204ENST00000464612 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
SNHG12-204ENST00000464612 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNHG12-204ENST00000464612 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
SNHG12-204ENST00000464612 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
SNHG12-204ENST00000464612 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
SNHG12-204ENST00000464612 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
SNHG12-204ENST00000464612 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
SNHG12-204ENST00000464612 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
SNHG12-204ENST00000464612 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
SNHG12-204ENST00000464612 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
SNHG12-204ENST00000464612 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
SNHG12-204ENST00000464612 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
SNHG12-204ENST00000464612 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
SNHG12-204ENST00000464612 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
SNHG12-204ENST00000464612 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
SNHG12-204ENST00000464612 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
SNHG12-204ENST00000464612 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
SNHG12-204ENST00000464612 WIZO95785 1651 aa16.54■□□□□ 0.24
SNHG12-204ENST00000464612 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
SNHG12-204ENST00000464612 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
SNHG12-204ENST00000464612 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
SNHG12-204ENST00000464612 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
SNHG12-204ENST00000464612 NESP48681 1621 aa16.23■□□□□ 0.19
SNHG12-204ENST00000464612 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
SNHG12-204ENST00000464612 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
SNHG12-204ENST00000464612 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
SNHG12-204ENST00000464612 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
SNHG12-204ENST00000464612 CFTRP13569 1480 aa16.06■□□□□ 0.16
SNHG12-204ENST00000464612 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
SNHG12-204ENST00000464612 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.15
SNHG12-204ENST00000464612 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.14
SNHG12-204ENST00000464612 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
SNHG12-204ENST00000464612 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
SNHG12-204ENST00000464612 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
SNHG12-204ENST00000464612 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
SNHG12-204ENST00000464612 CUX2O14529 1486 aa15.83■□□□□ 0.12
SNHG12-204ENST00000464612 WDR62O43379 1518 aa15.82■□□□□ 0.12
SNHG12-204ENST00000464612 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
SNHG12-204ENST00000464612 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
SNHG12-204ENST00000464612 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
SNHG12-204ENST00000464612 CUX1P39880 1505 aa15.67■□□□□ 0.1
SNHG12-204ENST00000464612 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
SNHG12-204ENST00000464612 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
SNHG12-204ENST00000464612 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
SNHG12-204ENST00000464612 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
SNHG12-204ENST00000464612 SYNJ1O43426 1573 aa15.58■□□□□ 0.09
SNHG12-204ENST00000464612 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
SNHG12-204ENST00000464612 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
SNHG12-204ENST00000464612 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
SNHG12-204ENST00000464612 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
SNHG12-204ENST00000464612 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
SNHG12-204ENST00000464612 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
SNHG12-204ENST00000464612 SOGA1O94964 1423 aa15.52■□□□□ 0.08
SNHG12-204ENST00000464612 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
SNHG12-204ENST00000464612 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.062e-10■■■□□ 17.5
SNHG12-204ENST00000464612 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
SNHG12-204ENST00000464612 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
SNHG12-204ENST00000464612 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
SNHG12-204ENST00000464612 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
SNHG12-204ENST00000464612 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
SNHG12-204ENST00000464612 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
SNHG12-204ENST00000464612 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
SNHG12-204ENST00000464612 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
SNHG12-204ENST00000464612 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
SNHG12-204ENST00000464612 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
SNHG12-204ENST00000464612 CHD1O14646 1710 aa15.25■□□□□ 0.03
SNHG12-204ENST00000464612 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
SNHG12-204ENST00000464612 FBLN2P98095 1184 aa15.23■□□□□ 0.03
SNHG12-204ENST00000464612 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
SNHG12-204ENST00000464612 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
SNHG12-204ENST00000464612 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
SNHG12-204ENST00000464612 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
SNHG12-204ENST00000464612 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
SNHG12-204ENST00000464612 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
SNHG12-204ENST00000464612 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
SNHG12-204ENST00000464612 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
SNHG12-204ENST00000464612 IGF1RP08069 1367 aa15.17■□□□□ 0.02
SNHG12-204ENST00000464612 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
SNHG12-204ENST00000464612 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
SNHG12-204ENST00000464612 CUL7Q14999 1698 aa15.11■□□□□ 0.01
SNHG12-204ENST00000464612 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
SNHG12-204ENST00000464612 CEP170Q5SW79 1584 aa15.08■□□□□ 0
SNHG12-204ENST00000464612 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
SNHG12-204ENST00000464612 NUP160Q12769 1436 aa15.06■□□□□ 0
SNHG12-204ENST00000464612 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
SNHG12-204ENST00000464612 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
SNHG12-204ENST00000464612 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
SNHG12-204ENST00000464612 EEA1Q15075 1411 aa15□□□□□ -0.01
SNHG12-204ENST00000464612 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms