Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCNN1AP37088 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.75■■□□□ 1.71
SCNN1AP37088 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCNN1AP37088 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SCNN1AP37088 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCNN1AP37088 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCNN1AP37088 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCNN1AP37088 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCNN1AP37088 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SCNN1AP37088 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCNN1AP37088 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCNN1AP37088 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
SCNN1AP37088 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.73■■□□□ 1.71
SCNN1AP37088 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCNN1AP37088 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCNN1AP37088 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCNN1AP37088 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCNN1AP37088 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SCNN1AP37088 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCNN1AP37088 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCNN1AP37088 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCNN1AP37088 ECEL1P2-201ENST00000461596 1295 ntBASIC25.71■■□□□ 1.71
SCNN1AP37088 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.71■■□□□ 1.71
SCNN1AP37088 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.71■■□□□ 1.71
SCNN1AP37088 AC025884.2-201ENST00000553429 711 ntBASIC25.71■■□□□ 1.71
SCNN1AP37088 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.7■■□□□ 1.7
SCNN1AP37088 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.7■■□□□ 1.7
SCNN1AP37088 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.7■■□□□ 1.7
SCNN1AP37088 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.7■■□□□ 1.7
SCNN1AP37088 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCNN1AP37088 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCNN1AP37088 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCNN1AP37088 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCNN1AP37088 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCNN1AP37088 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCNN1AP37088 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCNN1AP37088 GPX1-201ENST00000419349 1106 ntBASIC25.69■■□□□ 1.7
SCNN1AP37088 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.69■■□□□ 1.7
SCNN1AP37088 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.69■■□□□ 1.7
SCNN1AP37088 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
SCNN1AP37088 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCNN1AP37088 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCNN1AP37088 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCNN1AP37088 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
SCNN1AP37088 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCNN1AP37088 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.68■■□□□ 1.7
SCNN1AP37088 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.68■■□□□ 1.7
SCNN1AP37088 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.67■■□□□ 1.7
SCNN1AP37088 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCNN1AP37088 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCNN1AP37088 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCNN1AP37088 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.66■■□□□ 1.7
SCNN1AP37088 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.66■■□□□ 1.7
SCNN1AP37088 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.65■■□□□ 1.7
SCNN1AP37088 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.65■■□□□ 1.7
SCNN1AP37088 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.65■■□□□ 1.7
SCNN1AP37088 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCNN1AP37088 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.65■■□□□ 1.7
SCNN1AP37088 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.65■■□□□ 1.7
SCNN1AP37088 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCNN1AP37088 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCNN1AP37088 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.64■■□□□ 1.7
SCNN1AP37088 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.64■■□□□ 1.7
SCNN1AP37088 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
SCNN1AP37088 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCNN1AP37088 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.63■■□□□ 1.69
SCNN1AP37088 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.63■■□□□ 1.69
SCNN1AP37088 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SCNN1AP37088 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCNN1AP37088 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCNN1AP37088 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.62■■□□□ 1.69
SCNN1AP37088 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SCNN1AP37088 SMPD5-203ENST00000639008 1464 ntBASIC25.61■■□□□ 1.69
SCNN1AP37088 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
SCNN1AP37088 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.61■■□□□ 1.69
SCNN1AP37088 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.61■■□□□ 1.69
SCNN1AP37088 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.61■■□□□ 1.69
SCNN1AP37088 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.61■■□□□ 1.69
SCNN1AP37088 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCNN1AP37088 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SCNN1AP37088 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCNN1AP37088 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCNN1AP37088 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
SCNN1AP37088 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCNN1AP37088 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCNN1AP37088 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCNN1AP37088 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCNN1AP37088 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCNN1AP37088 MIR3960-201ENST00000583311 91 ntBASIC25.59■■□□□ 1.69
SCNN1AP37088 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.59■■□□□ 1.69
SCNN1AP37088 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.59■■□□□ 1.69
SCNN1AP37088 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCNN1AP37088 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.58■■□□□ 1.69
SCNN1AP37088 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.58■■□□□ 1.69
SCNN1AP37088 RNF126P1-201ENST00000567452 1320 ntBASIC25.58■■□□□ 1.69
SCNN1AP37088 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SCNN1AP37088 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SCNN1AP37088 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.57■■□□□ 1.68
SCNN1AP37088 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SCNN1AP37088 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms