Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRBV5-4A0A0C4DH59 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRBV5-4A0A0C4DH59 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.38■■□□□ 1.49
TRBV5-4A0A0C4DH59 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRBV5-4A0A0C4DH59 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRBV5-4A0A0C4DH59 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRBV5-4A0A0C4DH59 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRBV5-4A0A0C4DH59 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.37■■□□□ 1.49
TRBV5-4A0A0C4DH59 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRBV5-4A0A0C4DH59 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRBV5-4A0A0C4DH59 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.37■■□□□ 1.49
TRBV5-4A0A0C4DH59 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV5-4A0A0C4DH59 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRBV5-4A0A0C4DH59 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRBV5-4A0A0C4DH59 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRBV5-4A0A0C4DH59 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRBV5-4A0A0C4DH59 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRBV5-4A0A0C4DH59 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.34■■□□□ 1.49
TRBV5-4A0A0C4DH59 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.34■■□□□ 1.49
TRBV5-4A0A0C4DH59 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRBV5-4A0A0C4DH59 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRBV5-4A0A0C4DH59 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 GPX1-201ENST00000419349 1106 ntBASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.33■■□□□ 1.49
TRBV5-4A0A0C4DH59 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.32■■□□□ 1.48
TRBV5-4A0A0C4DH59 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.32■■□□□ 1.48
TRBV5-4A0A0C4DH59 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRBV5-4A0A0C4DH59 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRBV5-4A0A0C4DH59 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 ECEL1P2-201ENST00000461596 1295 ntBASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 AC025884.2-201ENST00000553429 711 ntBASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.31■■□□□ 1.48
TRBV5-4A0A0C4DH59 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.3■■□□□ 1.48
TRBV5-4A0A0C4DH59 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRBV5-4A0A0C4DH59 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
TRBV5-4A0A0C4DH59 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.29■■□□□ 1.48
TRBV5-4A0A0C4DH59 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.29■■□□□ 1.48
TRBV5-4A0A0C4DH59 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.28■■□□□ 1.48
TRBV5-4A0A0C4DH59 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRBV5-4A0A0C4DH59 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRBV5-4A0A0C4DH59 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRBV5-4A0A0C4DH59 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRBV5-4A0A0C4DH59 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.27■■□□□ 1.48
TRBV5-4A0A0C4DH59 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.27■■□□□ 1.48
TRBV5-4A0A0C4DH59 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.27■■□□□ 1.48
TRBV5-4A0A0C4DH59 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.26■■□□□ 1.47
TRBV5-4A0A0C4DH59 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.26■■□□□ 1.47
TRBV5-4A0A0C4DH59 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.26■■□□□ 1.47
TRBV5-4A0A0C4DH59 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
TRBV5-4A0A0C4DH59 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRBV5-4A0A0C4DH59 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.25■■□□□ 1.47
TRBV5-4A0A0C4DH59 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.25■■□□□ 1.47
TRBV5-4A0A0C4DH59 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.25■■□□□ 1.47
TRBV5-4A0A0C4DH59 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRBV5-4A0A0C4DH59 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.25■■□□□ 1.47
TRBV5-4A0A0C4DH59 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRBV5-4A0A0C4DH59 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRBV5-4A0A0C4DH59 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRBV5-4A0A0C4DH59 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.24■■□□□ 1.47
TRBV5-4A0A0C4DH59 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.24■■□□□ 1.47
TRBV5-4A0A0C4DH59 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRBV5-4A0A0C4DH59 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRBV5-4A0A0C4DH59 SMPD5-203ENST00000639008 1464 ntBASIC24.23■■□□□ 1.47
TRBV5-4A0A0C4DH59 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
TRBV5-4A0A0C4DH59 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRBV5-4A0A0C4DH59 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV5-4A0A0C4DH59 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.21■■□□□ 1.47
TRBV5-4A0A0C4DH59 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.21■■□□□ 1.47
TRBV5-4A0A0C4DH59 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRBV5-4A0A0C4DH59 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
TRBV5-4A0A0C4DH59 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
TRBV5-4A0A0C4DH59 RNF126P1-201ENST00000567452 1320 ntBASIC24.2■■□□□ 1.46
TRBV5-4A0A0C4DH59 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms