Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SOX30O94993 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX30O94993 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX30O94993 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SOX30O94993 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX30O94993 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX30O94993 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX30O94993 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX30O94993 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.62■□□□□ 0.25
SOX30O94993 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX30O94993 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SOX30O94993 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX30O94993 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX30O94993 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX30O94993 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX30O94993 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SOX30O94993 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX30O94993 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX30O94993 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SOX30O94993 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX30O94993 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SOX30O94993 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.61■□□□□ 0.25
SOX30O94993 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX30O94993 AC112698.1-201ENST00000510299 916 ntBASIC16.61■□□□□ 0.25
SOX30O94993 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX30O94993 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX30O94993 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX30O94993 AC097374.2-201ENST00000618617 1306 ntBASIC16.61■□□□□ 0.25
SOX30O94993 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX30O94993 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX30O94993 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX30O94993 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX30O94993 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX30O94993 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX30O94993 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX30O94993 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 KRT18P38-201ENST00000449496 1282 ntBASIC16.6■□□□□ 0.25
SOX30O94993 AL671277.2-201ENST00000458060 996 ntBASIC16.6■□□□□ 0.25
SOX30O94993 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX30O94993 GUSBP12-201ENST00000513727 720 ntBASIC16.6■□□□□ 0.25
SOX30O94993 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX30O94993 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX30O94993 AC005332.3-201ENST00000589904 676 ntBASIC16.6■□□□□ 0.25
SOX30O94993 NTF6B-201ENST00000591913 560 ntBASIC16.6■□□□□ 0.25
SOX30O94993 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX30O94993 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX30O94993 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX30O94993 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX30O94993 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms