Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 AC026748.1-201ENST00000624349 3251 ntBASIC11.94□□□□□ -0.5
SIGMAR1Q99720 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 ST20-AS1-201ENST00000560255 4223 ntBASIC11.94□□□□□ -0.5
SIGMAR1Q99720 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SIGMAR1Q99720 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 PTCHD3P2-201ENST00000424937 1205 ntBASIC11.93□□□□□ -0.5
SIGMAR1Q99720 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 AL671710.1-201ENST00000610245 2349 ntBASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.93□□□□□ -0.5
SIGMAR1Q99720 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SIGMAR1Q99720 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SIGMAR1Q99720 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SIGMAR1Q99720 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms