RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
VGLL3-202ENST00000398399 MYT1Q01538 1121 aa22.08■■□□□ 1.13
VGLL3-202ENST00000398399 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
VGLL3-202ENST00000398399 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
VGLL3-202ENST00000398399 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.02
VGLL3-202ENST00000398399 ERICH6Q7L0X2 663 aa21.37■■□□□ 1.01
VGLL3-202ENST00000398399 NISCHQ9Y2I1 1504 aa21.35■■□□□ 1.01
VGLL3-202ENST00000398399 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
VGLL3-202ENST00000398399 ZEB1P37275 1124 aaPredicted RBP21.2■□□□□ 0.98
VGLL3-202ENST00000398399 APLP2Q06481 763 aa21.09■□□□□ 0.97
VGLL3-202ENST00000398399 NEFLP07196 543 aa20.82■□□□□ 0.92
VGLL3-202ENST00000398399 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
VGLL3-202ENST00000398399 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
VGLL3-202ENST00000398399 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
VGLL3-202ENST00000398399 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
VGLL3-202ENST00000398399 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
VGLL3-202ENST00000398399 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
VGLL3-202ENST00000398399 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.85
VGLL3-202ENST00000398399 RTL5Q5HYW3 569 aaPredicted RBP20.08■□□□□ 0.8
VGLL3-202ENST00000398399 TRIM26Q12899 539 aaPredicted RBP20.03■□□□□ 0.8
VGLL3-202ENST00000398399 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
VGLL3-202ENST00000398399 HRCP23327 699 aa20■□□□□ 0.79
VGLL3-202ENST00000398399 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
VGLL3-202ENST00000398399 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
VGLL3-202ENST00000398399 ATP1B4Q9UN42 357 aaPredicted RBP19.63■□□□□ 0.73
VGLL3-202ENST00000398399 RANGAP1P46060 587 aaPredicted RBP19.61■□□□□ 0.73
VGLL3-202ENST00000398399 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
VGLL3-202ENST00000398399 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
VGLL3-202ENST00000398399 GLIPR1L2Q4G1C9 344 aa19.48■□□□□ 0.71
VGLL3-202ENST00000398399 MYT1LQ9UL68 1186 aa19.44■□□□□ 0.7
VGLL3-202ENST00000398399 CDK11AQ9UQ88 783 aaPredicted RBP19.39■□□□□ 0.69
VGLL3-202ENST00000398399 GTF3C3Q9Y5Q9 886 aa19.27■□□□□ 0.68
VGLL3-202ENST00000398399 ANP32AP39687 249 aaKnown RBP19.25■□□□□ 0.67
VGLL3-202ENST00000398399 POLR3GLQ9BT43 218 aa19.23■□□□□ 0.67
VGLL3-202ENST00000398399 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
VGLL3-202ENST00000398399 ANP32BQ92688 251 aaKnown RBP19.17■□□□□ 0.66
VGLL3-202ENST00000398399 ANP32CO43423 234 aa19.1■□□□□ 0.65
VGLL3-202ENST00000398399 ZBTB47Q9UFB7 747 aaPredicted RBP19.08■□□□□ 0.65
VGLL3-202ENST00000398399 ITGAEP38570 1179 aa19.07■□□□□ 0.64
VGLL3-202ENST00000398399 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
VGLL3-202ENST00000398399 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
VGLL3-202ENST00000398399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
VGLL3-202ENST00000398399 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
VGLL3-202ENST00000398399 BCANQ96GW7 911 aa18.94■□□□□ 0.62
VGLL3-202ENST00000398399 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
VGLL3-202ENST00000398399 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
VGLL3-202ENST00000398399 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
VGLL3-202ENST00000398399 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
VGLL3-202ENST00000398399 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.6
VGLL3-202ENST00000398399 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.6
VGLL3-202ENST00000398399 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
VGLL3-202ENST00000398399 HSP90AA1P07900 732 aaKnown RBP18.77■□□□□ 0.6
VGLL3-202ENST00000398399 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
VGLL3-202ENST00000398399 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
VGLL3-202ENST00000398399 NEFMP07197 916 aa18.68■□□□□ 0.58
VGLL3-202ENST00000398399 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
VGLL3-202ENST00000398399 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
VGLL3-202ENST00000398399 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
VGLL3-202ENST00000398399 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
VGLL3-202ENST00000398399 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
VGLL3-202ENST00000398399 FKBP8Q14318 412 aa18.52■□□□□ 0.56
VGLL3-202ENST00000398399 NBR1Q14596 966 aa18.51■□□□□ 0.55
VGLL3-202ENST00000398399 DDRGK1Q96HY6 314 aa18.47■□□□□ 0.55
VGLL3-202ENST00000398399 ZNF326Q5BKZ1 582 aaKnown RBP18.44■□□□□ 0.54
VGLL3-202ENST00000398399 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.44■□□□□ 0.54
VGLL3-202ENST00000398399 TRIM44Q96DX7 344 aaPredicted RBP18.42■□□□□ 0.54
VGLL3-202ENST00000398399 BECN1Q14457 450 aa18.42■□□□□ 0.54
VGLL3-202ENST00000398399 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
VGLL3-202ENST00000398399 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
VGLL3-202ENST00000398399 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
VGLL3-202ENST00000398399 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
VGLL3-202ENST00000398399 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
VGLL3-202ENST00000398399 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
VGLL3-202ENST00000398399 SLC24A1O60721 1099 aa18.27■□□□□ 0.52
VGLL3-202ENST00000398399 NCLP19338 710 aaKnown RBP18.27■□□□□ 0.52
VGLL3-202ENST00000398399 BCL11AQ9H165 835 aa18.26■□□□□ 0.51
VGLL3-202ENST00000398399 CDK11BP21127 795 aaKnown RBP18.25■□□□□ 0.51
VGLL3-202ENST00000398399 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
VGLL3-202ENST00000398399 ARXQ96QS3 562 aa18.19■□□□□ 0.5
VGLL3-202ENST00000398399 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
VGLL3-202ENST00000398399 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
VGLL3-202ENST00000398399 NAP1L5Q96NT1 182 aaPredicted RBP18.1■□□□□ 0.49
VGLL3-202ENST00000398399 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
VGLL3-202ENST00000398399 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
VGLL3-202ENST00000398399 DNTTIP2Q5QJE6 756 aaKnown RBP18.07■□□□□ 0.48
VGLL3-202ENST00000398399 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
VGLL3-202ENST00000398399 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
VGLL3-202ENST00000398399 GOLGA6L6A8MZA4 724 aa18.06■□□□□ 0.48
VGLL3-202ENST00000398399 CHAF1AQ13111 956 aaPredicted RBP18.06■□□□□ 0.48
VGLL3-202ENST00000398399 ZRSR1Q15695 479 aaKnown RBP18.06■□□□□ 0.48
VGLL3-202ENST00000398399 CASC1Q6TDU7 716 aa18.06■□□□□ 0.48
VGLL3-202ENST00000398399 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
VGLL3-202ENST00000398399 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
VGLL3-202ENST00000398399 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
VGLL3-202ENST00000398399 NRDCO43847 1150 aa17.98■□□□□ 0.47
VGLL3-202ENST00000398399 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
VGLL3-202ENST00000398399 MIER1Q8N108 512 aa17.9■□□□□ 0.46
VGLL3-202ENST00000398399 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
VGLL3-202ENST00000398399 MSNP26038 577 aaKnown RBP17.89■□□□□ 0.45
VGLL3-202ENST00000398399 PTMSP20962 102 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms