RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
CCP110-203ENST00000396212 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
CCP110-203ENST00000396212 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
CCP110-203ENST00000396212 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
CCP110-203ENST00000396212 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
CCP110-203ENST00000396212 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
CCP110-203ENST00000396212 PCGF6Q9BYE7 350 aa22.41■■□□□ 1.18
CCP110-203ENST00000396212 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
CCP110-203ENST00000396212 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
CCP110-203ENST00000396212 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
CCP110-203ENST00000396212 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
CCP110-203ENST00000396212 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
CCP110-203ENST00000396212 APLP2Q06481 763 aa21.84■■□□□ 1.09
CCP110-203ENST00000396212 MYT1Q01538 1121 aa21.84■■□□□ 1.09
CCP110-203ENST00000396212 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
CCP110-203ENST00000396212 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
CCP110-203ENST00000396212 HRCP23327 699 aa21.49■■□□□ 1.03
CCP110-203ENST00000396212 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
CCP110-203ENST00000396212 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
CCP110-203ENST00000396212 NEFLP07196 543 aa21.33■■□□□ 1
CCP110-203ENST00000396212 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
CCP110-203ENST00000396212 TRIM26Q12899 539 aaPredicted RBP21.23■□□□□ 0.99
CCP110-203ENST00000396212 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
CCP110-203ENST00000396212 ATP1B4Q9UN42 357 aaPredicted RBP21■□□□□ 0.95
CCP110-203ENST00000396212 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
CCP110-203ENST00000396212 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
CCP110-203ENST00000396212 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
CCP110-203ENST00000396212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
CCP110-203ENST00000396212 DAXXQ9UER7 740 aaPredicted RBP20.66■□□□□ 0.9
CCP110-203ENST00000396212 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
CCP110-203ENST00000396212 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
CCP110-203ENST00000396212 ITGAEP38570 1179 aa20.61■□□□□ 0.89
CCP110-203ENST00000396212 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
CCP110-203ENST00000396212 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
CCP110-203ENST00000396212 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
CCP110-203ENST00000396212 BCANQ96GW7 911 aa20.46■□□□□ 0.87
CCP110-203ENST00000396212 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
CCP110-203ENST00000396212 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
CCP110-203ENST00000396212 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
CCP110-203ENST00000396212 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
CCP110-203ENST00000396212 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
CCP110-203ENST00000396212 ANP32CO43423 234 aa19.97■□□□□ 0.79
CCP110-203ENST00000396212 FAM50AQ14320 339 aaKnown RBP19.96■□□□□ 0.79
CCP110-203ENST00000396212 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
CCP110-203ENST00000396212 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
CCP110-203ENST00000396212 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
CCP110-203ENST00000396212 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
CCP110-203ENST00000396212 FKBP8Q14318 412 aa19.8■□□□□ 0.76
CCP110-203ENST00000396212 EIF5BO60841 1220 aaKnown RBP19.77■□□□□ 0.76
CCP110-203ENST00000396212 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.76
CCP110-203ENST00000396212 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
CCP110-203ENST00000396212 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
CCP110-203ENST00000396212 NBR1Q14596 966 aa19.59■□□□□ 0.73
CCP110-203ENST00000396212 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
CCP110-203ENST00000396212 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.72
CCP110-203ENST00000396212 BCL11AQ9H165 835 aa19.52■□□□□ 0.72
CCP110-203ENST00000396212 MIER1Q8N108 512 aa19.47■□□□□ 0.71
CCP110-203ENST00000396212 HNRNPUQ00839 825 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCP110-203ENST00000396212 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
CCP110-203ENST00000396212 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
CCP110-203ENST00000396212 FAM9BQ8IZU0 186 aa19.37■□□□□ 0.69
CCP110-203ENST00000396212 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
CCP110-203ENST00000396212 GLIPR1L2Q4G1C9 344 aa19.36■□□□□ 0.69
CCP110-203ENST00000396212 ANP32EQ9BTT0 268 aa19.35■□□□□ 0.69
CCP110-203ENST00000396212 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
CCP110-203ENST00000396212 ARXQ96QS3 562 aa19.3■□□□□ 0.68
CCP110-203ENST00000396212 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
CCP110-203ENST00000396212 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
CCP110-203ENST00000396212 ANP32BQ92688 251 aaKnown RBP19.27■□□□□ 0.68
CCP110-203ENST00000396212 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
CCP110-203ENST00000396212 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
CCP110-203ENST00000396212 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
CCP110-203ENST00000396212 ARID3CA6NKF2 412 aa19.2■□□□□ 0.66
CCP110-203ENST00000396212 HSP90AA1P07900 732 aaKnown RBP19.19■□□□□ 0.66
CCP110-203ENST00000396212 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
CCP110-203ENST00000396212 UPF2Q9HAU5 1272 aaKnown RBP19.15■□□□□ 0.66
CCP110-203ENST00000396212 HIRIP3Q9BW71 556 aaPredicted RBP19.15■□□□□ 0.66
CCP110-203ENST00000396212 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
CCP110-203ENST00000396212 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
CCP110-203ENST00000396212 NEFMP07197 916 aa19.06■□□□□ 0.64
CCP110-203ENST00000396212 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
CCP110-203ENST00000396212 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
CCP110-203ENST00000396212 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
CCP110-203ENST00000396212 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.64
CCP110-203ENST00000396212 SUPT16HQ9Y5B9 1047 aaKnown RBP19.01■□□□□ 0.63
CCP110-203ENST00000396212 ABCC9O60706 1549 aa18.98■□□□□ 0.63
CCP110-203ENST00000396212 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.94■□□□□ 0.62
CCP110-203ENST00000396212 DDRGK1Q96HY6 314 aa18.93■□□□□ 0.62
CCP110-203ENST00000396212 SENP3-EIF4A1A0A087X0R7 540 aa18.92■□□□□ 0.62
CCP110-203ENST00000396212 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
CCP110-203ENST00000396212 FBLN2P98095 1184 aa18.91■□□□□ 0.62
CCP110-203ENST00000396212 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
CCP110-203ENST00000396212 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
CCP110-203ENST00000396212 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCP110-203ENST00000396212 TRIM44Q96DX7 344 aaPredicted RBP18.84■□□□□ 0.61
CCP110-203ENST00000396212 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
CCP110-203ENST00000396212 BECN1Q14457 450 aa18.81■□□□□ 0.6
CCP110-203ENST00000396212 KDM2AQ9Y2K7 1162 aa18.79■□□□□ 0.6
CCP110-203ENST00000396212 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
CCP110-203ENST00000396212 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms