RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 NISCHQ9Y2I1 1504 aa51.97■■■■■ 5.91
XPA-201ENST00000375128 CCDC180Q9P1Z9 1646 aa46■■■■■ 4.95
XPA-201ENST00000375128 ABCC9O60706 1549 aa44.7■■■■■ 4.75
XPA-201ENST00000375128 DCAF8L2P0C7V8 631 aa43.44■■■■■ 4.54
XPA-201ENST00000375128 ZCCHC6Q5VYS8 1495 aaKnown RBP43.36■■■■■ 4.53
XPA-201ENST00000375128 NACADO15069 1562 aa43.15■■■■■ 4.5
XPA-201ENST00000375128 RB1CC1Q8TDY2 1594 aa43.13■■■■■ 4.49
XPA-201ENST00000375128 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
XPA-201ENST00000375128 DCAF1Q9Y4B6 1507 aa42.96■■■■■ 4.47
XPA-201ENST00000375128 UNC13AQ9UPW8 1703 aa42.19■■■■■ 4.34
XPA-201ENST00000375128 SCRIBQ14160 1630 aa42.09■■■■■ 4.33
XPA-201ENST00000375128 PABPN1Q86U42 306 aaKnown RBP eCLIP41.87■■■■■ 4.29
XPA-201ENST00000375128 BICRAQ9NZM4 1560 aa41.78■■■■■ 4.28
XPA-201ENST00000375128 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
XPA-201ENST00000375128 EIF4G1Q04637 1599 aaKnown RBP40.67■■■■■ 4.1
XPA-201ENST00000375128 DNAJC5BQ9UF47 199 aa40.62■■■■■ 4.09
XPA-201ENST00000375128 CECR2Q9BXF3 1484 aa40.47■■■■■ 4.07
XPA-201ENST00000375128 CC2D2AQ9P2K1 1620 aa40.42■■■■■ 4.06
XPA-201ENST00000375128 BAZ1AQ9NRL2 1556 aaPredicted RBP40.26■■■■■ 4.04
XPA-201ENST00000375128 SMARCA4P51532 1647 aa40.25■■■■■ 4.03
XPA-201ENST00000375128 MROH2BQ7Z745 1585 aa40.08■■■■■ 4.01
XPA-201ENST00000375128 ATAD2BQ9ULI0 1458 aa39.92■■■■□ 3.98
XPA-201ENST00000375128 SMARCA2P51531 1590 aa39.88■■■■□ 3.97
XPA-201ENST00000375128 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
XPA-201ENST00000375128 PEG3Q9GZU2 1588 aa39.79■■■■□ 3.96
XPA-201ENST00000375128 RSF1Q96T23 1441 aaPredicted RBP39.76■■■■□ 3.96
XPA-201ENST00000375128 WIZO95785 1651 aa39.71■■■■□ 3.95
XPA-201ENST00000375128 HMGXB3Q12766 1538 aa39.64■■■■□ 3.94
XPA-201ENST00000375128 BAZ1BQ9UIG0 1483 aaKnown RBP39.64■■■■□ 3.94
XPA-201ENST00000375128 TOP2AP11388 1531 aaKnown RBP39.26■■■■□ 3.88
XPA-201ENST00000375128 SUPT5HO00267 1087 aaKnown RBP39.22■■■■□ 3.87
XPA-201ENST00000375128 CCDC88BA6NC98 1476 aa38.82■■■■□ 3.8
XPA-201ENST00000375128 NESP48681 1621 aa38.79■■■■□ 3.8
XPA-201ENST00000375128 LAMC3Q9Y6N6 1575 aa38.71■■■■□ 3.79
XPA-201ENST00000375128 CADPSQ9ULU8 1353 aa38.7■■■■□ 3.79
XPA-201ENST00000375128 CFTRP13569 1480 aa38.54■■■■□ 3.76
XPA-201ENST00000375128 ERCC6Q03468 1493 aa38.49■■■■□ 3.75
XPA-201ENST00000375128 PDS5BQ9NTI5 1447 aa38.45■■■■□ 3.75
XPA-201ENST00000375128 KIF21AQ7Z4S6 1674 aa38.35■■■■□ 3.73
XPA-201ENST00000375128 PRDM2Q13029 1718 aa38.32■■■■□ 3.72
XPA-201ENST00000375128 FANCD2Q9BXW9 1451 aa38.27■■■■□ 3.72
XPA-201ENST00000375128 CEP164Q9UPV0 1460 aa38.18■■■■□ 3.7
XPA-201ENST00000375128 THOC2Q8NI27 1593 aaKnown RBP38.06■■■■□ 3.68
XPA-201ENST00000375128 MRC2Q9UBG0 1479 aa38.03■■■■□ 3.68
XPA-201ENST00000375128 WDR62O43379 1518 aa37.87■■■■□ 3.65
XPA-201ENST00000375128 URB2Q14146 1524 aaKnown RBP37.85■■■■□ 3.65
XPA-201ENST00000375128 CUX2O14529 1486 aa37.85■■■■□ 3.65
XPA-201ENST00000375128 ABCC8Q09428 1581 aa37.71■■■■□ 3.63
XPA-201ENST00000375128 TOPBP1Q92547 1522 aa37.7■■■■□ 3.63
XPA-201ENST00000375128 DNMBPQ6XZF7 1577 aa37.69■■■■□ 3.62
XPA-201ENST00000375128 CUX1P39880 1505 aa37.57■■■■□ 3.6
XPA-201ENST00000375128 WRNQ14191 1432 aaPredicted RBP eCLIP37.51■■■■□ 3.59
XPA-201ENST00000375128 POLA1P09884 1462 aaPredicted RBP37.4■■■■□ 3.58
XPA-201ENST00000375128 FGD5Q6ZNL6 1462 aa37.39■■■■□ 3.58
XPA-201ENST00000375128 SYNJ1O43426 1573 aa37.38■■■■□ 3.57
XPA-201ENST00000375128 IFT140Q96RY7 1462 aa37.36■■■■□ 3.57
XPA-201ENST00000375128 TOP2BQ02880 1626 aa37.35■■■■□ 3.57
XPA-201ENST00000375128 BIVM-ERCC5R4GMW8 1640 aa37.34■■■■□ 3.57
XPA-201ENST00000375128 SOGA1O94964 1423 aa37.29■■■■□ 3.56
XPA-201ENST00000375128 RAD54L2Q9Y4B4 1467 aa37.28■■■■□ 3.56
XPA-201ENST00000375128 TARBP1Q13395 1621 aaKnown RBP37.24■■■■□ 3.55
XPA-201ENST00000375128 ZNF608Q9ULD9 1512 aaPredicted RBP37.16■■■■□ 3.54
XPA-201ENST00000375128 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
XPA-201ENST00000375128 EIF4G3O43432 1585 aaKnown RBP37.03■■■■□ 3.52
XPA-201ENST00000375128 WDR97A6NE52 1622 aa37.03■■■■□ 3.52
XPA-201ENST00000375128 AQRO60306 1485 aaKnown RBP eCLIP37.03■■■■□ 3.52
XPA-201ENST00000375128 ABCA10Q8WWZ4 1543 aa37.02■■■■□ 3.52
XPA-201ENST00000375128 TRIM41Q8WV44 630 aa37■■■■□ 3.51
XPA-201ENST00000375128 GAPVD1Q14C86 1478 aa36.85■■■■□ 3.49
XPA-201ENST00000375128 ABCA5Q8WWZ7 1642 aa36.84■■■■□ 3.49
XPA-201ENST00000375128 CHIC1Q5VXU3 224 aa36.78■■■■□ 3.48
XPA-201ENST00000375128 GRIN2BQ13224 1484 aa36.78■■■■□ 3.48
XPA-201ENST00000375128 PBRM1Q86U86 1689 aa36.76■■■■□ 3.48
XPA-201ENST00000375128 KIF27Q86VH2 1401 aa36.69■■■■□ 3.46
XPA-201ENST00000375128 SNAPC4Q5SXM2 1469 aa36.68■■■■□ 3.46
XPA-201ENST00000375128 MAGI1Q96QZ7 1491 aaPredicted RBP36.61■■■■□ 3.45
XPA-201ENST00000375128 FBLN2P98095 1184 aa36.59■■■■□ 3.45
XPA-201ENST00000375128 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
XPA-201ENST00000375128 RUSC2Q8N2Y8 1516 aa36.52■■■■□ 3.44
XPA-201ENST00000375128 CHD1O14646 1710 aa36.52■■■■□ 3.44
XPA-201ENST00000375128 CHMP7Q8WUX9 453 aaPredicted RBP36.51■■■■□ 3.44
XPA-201ENST00000375128 SYNJ2O15056 1496 aa36.48■■■■□ 3.43
XPA-201ENST00000375128 IGF1RP08069 1367 aa36.48■■■■□ 3.43
XPA-201ENST00000375128 ADAMTS12P58397 1594 aa36.46■■■■□ 3.43
XPA-201ENST00000375128 OSCARQ8IYS5 282 aa36.44■■■■□ 3.42
XPA-201ENST00000375128 FHAD1B1AJZ9 1412 aa36.43■■■■□ 3.42
XPA-201ENST00000375128 CUL7Q14999 1698 aa36.36■■■■□ 3.41
XPA-201ENST00000375128 GRIN2AQ12879 1464 aa36.3■■■■□ 3.4
XPA-201ENST00000375128 CARMIL1Q5VZK9 1371 aa36.29■■■■□ 3.4
XPA-201ENST00000375128 FAM9AQ8IZU1 332 aaPredicted RBP36.26■■■■□ 3.4
XPA-201ENST00000375128 DNAJC5Q9H3Z4 198 aa36.25■■■■□ 3.39
XPA-201ENST00000375128 EEA1Q15075 1411 aa36.24■■■■□ 3.39
XPA-201ENST00000375128 CSRNP3Q8WYN3 585 aa36.2■■■■□ 3.39
XPA-201ENST00000375128 RAPGEF2Q9Y4G8 1499 aa36.12■■■■□ 3.37
XPA-201ENST00000375128 CEP170Q5SW79 1584 aa36.11■■■■□ 3.37
XPA-201ENST00000375128 NUP160Q12769 1436 aa36.1■■■■□ 3.37
XPA-201ENST00000375128 CLASP1Q7Z460 1538 aa36.06■■■■□ 3.36
XPA-201ENST00000375128 PRXQ9BXM0 1461 aa36.06■■■■□ 3.36
XPA-201ENST00000375128 KIAA0586Q9BVV6 1533 aa35.88■■■■□ 3.33
XPA-201ENST00000375128 KIF21BO75037 1637 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms