Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CHCHD1Q96BP2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 MIR939-201ENST00000401314 82 ntBASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 AL160286.2-201ENST00000567150 934 ntBASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 AC004854.2-201ENST00000608450 1441 ntBASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 HLA-J-201ENST00000462773 1622 ntBASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 AC093010.1-201ENST00000473625 1624 ntBASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHCHD1Q96BP2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.08□□□□□ -0.31
CHCHD1Q96BP2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CHCHD1Q96BP2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.08□□□□□ -0.31
CHCHD1Q96BP2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CHCHD1Q96BP2 AC092850.2-201ENST00000623821 2697 ntBASIC13.08□□□□□ -0.31
CHCHD1Q96BP2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
CHCHD1Q96BP2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 AL121906.2-201ENST00000621597 723 ntBASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 AC105917.1-201ENST00000506637 2539 ntBASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHCHD1Q96BP2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHCHD1Q96BP2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.07□□□□□ -0.32
CHCHD1Q96BP2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms