Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.95■□□□□ 0.625e-7■■■□□ 14.7
MATR3P43243 SPCS2-204ENST00000527225 321 ntTSL 518.69■□□□□ 0.585e-7■■■□□ 14.7
MATR3P43243 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.55■□□□□ 0.565e-7■■■□□ 14.7
MATR3P43243 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.445e-7■■■□□ 14.7
MATR3P43243 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.145e-7■■■□□ 14.7
MATR3P43243 SPCS2-206ENST00000528265 577 ntTSL 58.28□□□□□ -1.085e-7■■■□□ 14.7
MATR3P43243 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.86■■□□□ 1.571e-32■■■□□ 14.7
MATR3P43243 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.81e-32■■■□□ 14.7
MATR3P43243 PDS5A-204ENST00000503867 640 ntTSL 27.22□□□□□ -1.251e-32■■■□□ 14.7
MATR3P43243 PDS5A-209ENST00000512643 581 ntTSL 45.3□□□□□ -1.561e-32■■■□□ 14.7
MATR3P43243 PDS5A-210ENST00000513798 494 ntTSL 32.26□□□□□ -2.051e-32■■■□□ 14.7
MATR3P43243 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.55■■□□□ 1.28e-7■■■□□ 14.7
MATR3P43243 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.058e-7■■■□□ 14.7
MATR3P43243 BCR-207ENST00000463770 168 ntTSL 1 (best)16.1■□□□□ 0.178e-7■■■□□ 14.7
MATR3P43243 BCR-212ENST00000479188 658 ntTSL 414.75□□□□□ -0.058e-7■■■□□ 14.7
MATR3P43243 BCR-214ENST00000487679 231 ntTSL 1 (best)9□□□□□ -0.978e-7■■■□□ 14.7
MATR3P43243 CFI-203ENST00000504853 2368 ntTSL 26.88□□□□□ -1.311e-7■■■□□ 14.7
MATR3P43243 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.7□□□□□ -1.663e-7■■■□□ 14.7
MATR3P43243 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.622e-8■■■□□ 14.7
MATR3P43243 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.892e-8■■■□□ 14.7
MATR3P43243 EPB41L2-218ENST00000527659 2436 ntTSL 5 BASIC11.7□□□□□ -0.541e-8■■■□□ 14.7
MATR3P43243 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.37□□□□□ -1.231e-8■■■□□ 14.7
MATR3P43243 RERE-208ENST00000465125 396 ntTSL 526.78■■□□□ 1.881e-6■■■□□ 14.7
MATR3P43243 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC15.02□□□□□ -0.011e-6■■■□□ 14.7
MATR3P43243 RERE-215ENST00000492766 367 ntTSL 314.87□□□□□ -0.031e-6■■■□□ 14.7
MATR3P43243 RERE-205ENST00000460659 454 ntTSL 211.11□□□□□ -0.631e-6■■■□□ 14.7
MATR3P43243 RERE-214ENST00000488215 962 ntTSL 310.73□□□□□ -0.691e-6■■■□□ 14.7
MATR3P43243 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.73■■□□□ 1.879e-8■■■□□ 14.7
MATR3P43243 UBE2D2-204ENST00000505007 1170 ntTSL 320.97■□□□□ 0.959e-8■■■□□ 14.7
MATR3P43243 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.839e-8■■■□□ 14.7
MATR3P43243 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC11.33□□□□□ -0.69e-8■■■□□ 14.7
MATR3P43243 UBE2D2-206ENST00000510470 256 ntTSL 28.32□□□□□ -1.089e-8■■■□□ 14.7
MATR3P43243 UBE2D2-203ENST00000398734 901 ntTSL 57.83□□□□□ -1.169e-8■■■□□ 14.7
MATR3P43243 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.061e-7■■■□□ 14.7
MATR3P43243 SMYD2-203ENST00000460580 1618 ntTSL 1 (best)21.4■■□□□ 1.021e-7■■■□□ 14.7
MATR3P43243 SMYD2-204ENST00000471645 4732 ntTSL 1 (best)16.51■□□□□ 0.231e-7■■■□□ 14.7
MATR3P43243 SMYD2-206ENST00000491455 3809 ntTSL 214.62□□□□□ -0.071e-7■■■□□ 14.7
MATR3P43243 BLCAP-213ENST00000467603 439 ntTSL 316.64■□□□□ 0.252e-6■■■□□ 14.6
MATR3P43243 FIGN-203ENST00000482917 600 ntTSL 58.38□□□□□ -1.071e-6■■■□□ 14.6
MATR3P43243 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.291e-6■■■□□ 14.6
MATR3P43243 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.19□□□□□ -1.421e-6■■■□□ 14.6
MATR3P43243 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.663e-6■■■□□ 14.6
MATR3P43243 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.76■■■□□ 2.033e-6■■■□□ 14.6
MATR3P43243 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.09■■□□□ 1.293e-6■■■□□ 14.6
MATR3P43243 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.633e-6■■■□□ 14.6
MATR3P43243 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.15■□□□□ 0.53e-6■■■□□ 14.6
MATR3P43243 SSBP3-210ENST00000525990 701 ntTSL 213.17□□□□□ -0.33e-6■■■□□ 14.6
MATR3P43243 SSBP3-215ENST00000533946 431 ntTSL 310.51□□□□□ -0.733e-6■■■□□ 14.6
MATR3P43243 MGST2-203ENST00000503816 1780 ntTSL 518.13■□□□□ 0.497e-7■■■□□ 14.6
MATR3P43243 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.857e-7■■■□□ 14.6
MATR3P43243 MGST2-206ENST00000515137 1013 ntTSL 1 (best)9.64□□□□□ -0.877e-7■■■□□ 14.6
MATR3P43243 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.227e-7■■■□□ 14.6
MATR3P43243 MGST2-205ENST00000515067 437 ntTSL 36.25□□□□□ -1.417e-7■■■□□ 14.6
MATR3P43243 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.36□□□□□ -1.557e-7■■■□□ 14.6
MATR3P43243 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.74□□□□□ -0.371e-6■■■□□ 14.6
MATR3P43243 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.391e-6■■■□□ 14.6
MATR3P43243 PUM1-215ENST00000525948 1103 ntTSL 311.02□□□□□ -0.652e-6■■■□□ 14.6
MATR3P43243 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.67□□□□□ -0.861e-6■■■□□ 14.6
MATR3P43243 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.861e-6■■■□□ 14.6
MATR3P43243 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.3□□□□□ -0.921e-6■■■□□ 14.6
MATR3P43243 PUM1-214ENST00000525843 4528 ntTSL 58.61□□□□□ -1.031e-6■■■□□ 14.6
MATR3P43243 PUM1-209ENST00000480602 906 ntTSL 57.71□□□□□ -1.182e-6■■■□□ 14.6
MATR3P43243 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.191e-6■■■□□ 14.6
MATR3P43243 PUM1-218ENST00000526215 586 ntTSL 26.97□□□□□ -1.291e-6■■■□□ 14.6
MATR3P43243 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.92□□□□□ -1.31e-6■■■□□ 14.6
MATR3P43243 KTN1-215ENST00000554567 730 ntTSL 528.97■■■□□ 2.231e-6■■■□□ 14.6
MATR3P43243 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.451e-6■■■□□ 14.6
MATR3P43243 KTN1-208ENST00000459737 4793 ntTSL 1 (best)2.57□□□□□ -21e-6■■■□□ 14.6
MATR3P43243 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.061e-6■■■□□ 14.6
MATR3P43243 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.081e-6■■■□□ 14.6
MATR3P43243 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.141e-6■■■□□ 14.6
MATR3P43243 TMEM131-209ENST00000489507 568 ntTSL 317.29■□□□□ 0.362e-6■■■□□ 14.6
MATR3P43243 TMEM131-203ENST00000418629 1105 ntTSL 216.26■□□□□ 0.192e-6■■■□□ 14.6
MATR3P43243 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.011e-6■■■□□ 14.6
MATR3P43243 TJP2-210ENST00000606364 591 ntTSL 413.32□□□□□ -0.281e-6■■■□□ 14.6
MATR3P43243 DOCK5-205ENST00000467709 4844 ntTSL 58.31□□□□□ -1.083e-13■■■□□ 14.6
MATR3P43243 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.079e-7■■■□□ 14.6
MATR3P43243 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.779e-7■■■□□ 14.6
MATR3P43243 WNK2-212ENST00000467401 2258 ntTSL 219.07■□□□□ 0.649e-7■■■□□ 14.6
MATR3P43243 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)18.94■□□□□ 0.629e-7■■■□□ 14.6
MATR3P43243 WNK2-203ENST00000411624 6679 ntTSL 1 (best)18.58■□□□□ 0.569e-7■■■□□ 14.6
MATR3P43243 WNK2-207ENST00000448251 3224 ntTSL 215.04■□□□□ -09e-7■■■□□ 14.6
MATR3P43243 TMEM165-206ENST00000508561 756 ntTSL 514.77□□□□□ -0.054e-13■■■□□ 14.6
MATR3P43243 TMEM165-203ENST00000506103 572 ntTSL 312.82□□□□□ -0.364e-13■■■□□ 14.6
MATR3P43243 TMEM165-212ENST00000608091 1567 ntTSL 311.83□□□□□ -0.524e-13■■■□□ 14.6
MATR3P43243 TMEM165-210ENST00000514904 1522 ntTSL 210.48□□□□□ -0.734e-13■■■□□ 14.6
MATR3P43243 TMEM165-211ENST00000515591 1786 ntTSL 26.91□□□□□ -1.34e-13■■■□□ 14.6
MATR3P43243 TMEM165-207ENST00000509575 570 ntTSL 23.05□□□□□ -1.924e-13■■■□□ 14.6
MATR3P43243 SLC39A14-210ENST00000520832 578 ntTSL 48.99□□□□□ -0.978e-7■■■□□ 14.6
MATR3P43243 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.54■■□□□ 1.21e-6■■■□□ 14.6
MATR3P43243 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.97■□□□□ 0.471e-6■■■□□ 14.6
MATR3P43243 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.41■□□□□ 0.061e-6■■■□□ 14.6
MATR3P43243 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC14□□□□□ -0.171e-6■■■□□ 14.6
MATR3P43243 HCG18-241ENST00000602290 821 ntTSL 2 BASIC12.22□□□□□ -0.451e-6■■■□□ 14.6
MATR3P43243 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.97□□□□□ -0.811e-6■■■□□ 14.6
MATR3P43243 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC9.88□□□□□ -0.831e-6■■■□□ 14.6
MATR3P43243 HCG18-234ENST00000413358 916 ntTSL 3 BASIC9.8□□□□□ -0.841e-6■■■□□ 14.6
MATR3P43243 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.64□□□□□ -1.191e-6■■■□□ 14.6
MATR3P43243 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.99□□□□□ -1.291e-6■■■□□ 14.6
MATR3P43243 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.24□□□□□ -1.411e-6■■■□□ 14.6
Retrieved 100 of 16,209 protein–RNA pairs in 78 ms