RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
PDS5A-209ENST00000512643 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
PDS5A-209ENST00000512643 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
PDS5A-209ENST00000512643 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
PDS5A-209ENST00000512643 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
PDS5A-209ENST00000512643 ADRA2BP18089 450 aa13.01□□□□□ -0.33
PDS5A-209ENST00000512643 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
PDS5A-209ENST00000512643 FOXD1Q16676 465 aa12.87□□□□□ -0.35
PDS5A-209ENST00000512643 KCNA4P22459 653 aa12.77□□□□□ -0.37
PDS5A-209ENST00000512643 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
PDS5A-209ENST00000512643 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
PDS5A-209ENST00000512643 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
PDS5A-209ENST00000512643 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
PDS5A-209ENST00000512643 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
PDS5A-209ENST00000512643 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
PDS5A-209ENST00000512643 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
PDS5A-209ENST00000512643 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
PDS5A-209ENST00000512643 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
PDS5A-209ENST00000512643 ZBTB22O15209 634 aa11.77□□□□□ -0.53
PDS5A-209ENST00000512643 MSH5O43196 834 aa11.63□□□□□ -0.55
PDS5A-209ENST00000512643 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
PDS5A-209ENST00000512643 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
PDS5A-209ENST00000512643 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
PDS5A-209ENST00000512643 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
PDS5A-209ENST00000512643 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
PDS5A-209ENST00000512643 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
PDS5A-209ENST00000512643 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
PDS5A-209ENST00000512643 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
PDS5A-209ENST00000512643 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
PDS5A-209ENST00000512643 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
PDS5A-209ENST00000512643 ATXN8OSP0DMR3 200 aa11.07□□□□□ -0.64
PDS5A-209ENST00000512643 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
PDS5A-209ENST00000512643 FKBP8Q14318 412 aa11□□□□□ -0.65
PDS5A-209ENST00000512643 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
PDS5A-209ENST00000512643 POTEDQ86YR6 584 aa10.77□□□□□ -0.69
PDS5A-209ENST00000512643 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
PDS5A-209ENST00000512643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.692e-8■■□□□ 14.2
PDS5A-209ENST00000512643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
PDS5A-209ENST00000512643 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
PDS5A-209ENST00000512643 SAMD1Q6SPF0 538 aaPredicted RBP10.69□□□□□ -0.7
PDS5A-209ENST00000512643 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
PDS5A-209ENST00000512643 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
PDS5A-209ENST00000512643 APLP2Q06481 763 aa10.43□□□□□ -0.74
PDS5A-209ENST00000512643 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
PDS5A-209ENST00000512643 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
PDS5A-209ENST00000512643 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
PDS5A-209ENST00000512643 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
PDS5A-209ENST00000512643 PROM2Q8N271 834 aa10.27□□□□□ -0.77
PDS5A-209ENST00000512643 FBLN2P98095 1184 aa10.26□□□□□ -0.77
PDS5A-209ENST00000512643 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
PDS5A-209ENST00000512643 TRHP20396 242 aaPredicted RBP10.2□□□□□ -0.78
PDS5A-209ENST00000512643 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
PDS5A-209ENST00000512643 IFNLR1Q8IU57 520 aaPredicted RBP10.17□□□□□ -0.78
PDS5A-209ENST00000512643 SPINK5Q9NQ38 1064 aaPredicted RBP10.16□□□□□ -0.78
PDS5A-209ENST00000512643 POLA2Q14181 598 aa10.15□□□□□ -0.78
PDS5A-209ENST00000512643 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
PDS5A-209ENST00000512643 CAPN15O75808 1086 aa10.09□□□□□ -0.79
PDS5A-209ENST00000512643 PKD2Q13563 968 aa10.07□□□□□ -0.8
PDS5A-209ENST00000512643 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
PDS5A-209ENST00000512643 RNF39Q9H2S5 420 aa10.03□□□□□ -0.8
PDS5A-209ENST00000512643 ABCB7O75027 752 aa9.98□□□□□ -0.81
PDS5A-209ENST00000512643 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
PDS5A-209ENST00000512643 SPOCK2Q92563 424 aa9.95□□□□□ -0.82
PDS5A-209ENST00000512643 BCANQ96GW7 911 aa9.94□□□□□ -0.82
PDS5A-209ENST00000512643 C1QBPQ07021 282 aaKnown RBP9.93□□□□□ -0.82
PDS5A-209ENST00000512643 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
PDS5A-209ENST00000512643 VSIG10Q8N0Z9 540 aa9.91□□□□□ -0.82
PDS5A-209ENST00000512643 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.89□□□□□ -0.83
PDS5A-209ENST00000512643 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
PDS5A-209ENST00000512643 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
PDS5A-209ENST00000512643 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
PDS5A-209ENST00000512643 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
PDS5A-209ENST00000512643 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
PDS5A-209ENST00000512643 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDS5A-209ENST00000512643 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
PDS5A-209ENST00000512643 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
PDS5A-209ENST00000512643 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
PDS5A-209ENST00000512643 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
PDS5A-209ENST00000512643 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
PDS5A-209ENST00000512643 SPDYE2Q495Y8 402 aa9.8□□□□□ -0.84
PDS5A-209ENST00000512643 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
PDS5A-209ENST00000512643 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
PDS5A-209ENST00000512643 RGL2O15211 777 aa9.79□□□□□ -0.84
PDS5A-209ENST00000512643 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDS5A-209ENST00000512643 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
PDS5A-209ENST00000512643 MIER1Q8N108 512 aa9.77□□□□□ -0.85
PDS5A-209ENST00000512643 DSG3P32926 999 aa9.76□□□□□ -0.85
PDS5A-209ENST00000512643 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
PDS5A-209ENST00000512643 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.86
PDS5A-209ENST00000512643 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
PDS5A-209ENST00000512643 CHGAP10645 457 aaKnown RBP9.68□□□□□ -0.86
PDS5A-209ENST00000512643 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
PDS5A-209ENST00000512643 TPRNQ4KMQ1 711 aa9.67□□□□□ -0.86
PDS5A-209ENST00000512643 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
PDS5A-209ENST00000512643 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
PDS5A-209ENST00000512643 HS6ST3Q8IZP7 471 aa9.57□□□□□ -0.88
PDS5A-209ENST00000512643 RNF25Q96BH1 459 aaPredicted RBP9.52□□□□□ -0.89
PDS5A-209ENST00000512643 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
PDS5A-209ENST00000512643 NBR1Q14596 966 aa9.51□□□□□ -0.89
PDS5A-209ENST00000512643 GSE1Q14687 1217 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms