RNA–Protein interactions for RNA: ENST00000510470.1

UBE2D2-206, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

TSL 2

Gene UBE2D2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-206ENST00000510470 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
UBE2D2-206ENST00000510470 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
UBE2D2-206ENST00000510470 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
UBE2D2-206ENST00000510470 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
UBE2D2-206ENST00000510470 FOXD1Q16676 465 aa21.56■■□□□ 1.04
UBE2D2-206ENST00000510470 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
UBE2D2-206ENST00000510470 MSH5O43196 834 aa20.33■□□□□ 0.85
UBE2D2-206ENST00000510470 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
UBE2D2-206ENST00000510470 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
UBE2D2-206ENST00000510470 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
UBE2D2-206ENST00000510470 ABCC9O60706 1549 aa19.98■□□□□ 0.79
UBE2D2-206ENST00000510470 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
UBE2D2-206ENST00000510470 ADRA2BP18089 450 aa19.85■□□□□ 0.77
UBE2D2-206ENST00000510470 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
UBE2D2-206ENST00000510470 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
UBE2D2-206ENST00000510470 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
UBE2D2-206ENST00000510470 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
UBE2D2-206ENST00000510470 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
UBE2D2-206ENST00000510470 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
UBE2D2-206ENST00000510470 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
UBE2D2-206ENST00000510470 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
UBE2D2-206ENST00000510470 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
UBE2D2-206ENST00000510470 NACADO15069 1562 aa18.27■□□□□ 0.52
UBE2D2-206ENST00000510470 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
UBE2D2-206ENST00000510470 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
UBE2D2-206ENST00000510470 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
UBE2D2-206ENST00000510470 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
UBE2D2-206ENST00000510470 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
UBE2D2-206ENST00000510470 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
UBE2D2-206ENST00000510470 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
UBE2D2-206ENST00000510470 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
UBE2D2-206ENST00000510470 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
UBE2D2-206ENST00000510470 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
UBE2D2-206ENST00000510470 CUX2O14529 1486 aa17.53■□□□□ 0.4
UBE2D2-206ENST00000510470 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
UBE2D2-206ENST00000510470 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
UBE2D2-206ENST00000510470 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
UBE2D2-206ENST00000510470 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
UBE2D2-206ENST00000510470 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
UBE2D2-206ENST00000510470 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
UBE2D2-206ENST00000510470 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
UBE2D2-206ENST00000510470 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
UBE2D2-206ENST00000510470 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
UBE2D2-206ENST00000510470 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
UBE2D2-206ENST00000510470 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
UBE2D2-206ENST00000510470 NESP48681 1621 aa16.96■□□□□ 0.3
UBE2D2-206ENST00000510470 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
UBE2D2-206ENST00000510470 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
UBE2D2-206ENST00000510470 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
UBE2D2-206ENST00000510470 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
UBE2D2-206ENST00000510470 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
UBE2D2-206ENST00000510470 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
UBE2D2-206ENST00000510470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.263e-7■■□□□ 12.8
UBE2D2-206ENST00000510470 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
UBE2D2-206ENST00000510470 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
UBE2D2-206ENST00000510470 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
UBE2D2-206ENST00000510470 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
UBE2D2-206ENST00000510470 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
UBE2D2-206ENST00000510470 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
UBE2D2-206ENST00000510470 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
UBE2D2-206ENST00000510470 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
UBE2D2-206ENST00000510470 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
UBE2D2-206ENST00000510470 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
UBE2D2-206ENST00000510470 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
UBE2D2-206ENST00000510470 WDR62O43379 1518 aa16.47■□□□□ 0.23
UBE2D2-206ENST00000510470 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
UBE2D2-206ENST00000510470 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
UBE2D2-206ENST00000510470 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
UBE2D2-206ENST00000510470 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
UBE2D2-206ENST00000510470 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
UBE2D2-206ENST00000510470 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
UBE2D2-206ENST00000510470 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
UBE2D2-206ENST00000510470 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
UBE2D2-206ENST00000510470 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
UBE2D2-206ENST00000510470 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
UBE2D2-206ENST00000510470 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
UBE2D2-206ENST00000510470 KCNA4P22459 653 aa16.1■□□□□ 0.17
UBE2D2-206ENST00000510470 DSG3P32926 999 aa16.1■□□□□ 0.17
UBE2D2-206ENST00000510470 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
UBE2D2-206ENST00000510470 CAPN15O75808 1086 aa16.09■□□□□ 0.17
UBE2D2-206ENST00000510470 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
UBE2D2-206ENST00000510470 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
UBE2D2-206ENST00000510470 CFTRP13569 1480 aa15.99■□□□□ 0.15
UBE2D2-206ENST00000510470 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
UBE2D2-206ENST00000510470 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
UBE2D2-206ENST00000510470 CHD1O14646 1710 aa15.95■□□□□ 0.14
UBE2D2-206ENST00000510470 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
UBE2D2-206ENST00000510470 APLP2Q06481 763 aa15.91■□□□□ 0.14
UBE2D2-206ENST00000510470 WIZO95785 1651 aa15.91■□□□□ 0.14
UBE2D2-206ENST00000510470 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
UBE2D2-206ENST00000510470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
UBE2D2-206ENST00000510470 FBLN2P98095 1184 aa15.83■□□□□ 0.12
UBE2D2-206ENST00000510470 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
UBE2D2-206ENST00000510470 AQRO60306 1485 aaKnown RBP eCLIP15.81■□□□□ 0.122e-7■■■□□ 17.7
UBE2D2-206ENST00000510470 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
UBE2D2-206ENST00000510470 POTEHQ6S545 545 aa15.78■□□□□ 0.12
UBE2D2-206ENST00000510470 TOPBP1Q92547 1522 aa15.77■□□□□ 0.11
UBE2D2-206ENST00000510470 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
UBE2D2-206ENST00000510470 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
UBE2D2-206ENST00000510470 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms