RNA–Protein interactions for RNA: ENST00000527225.1

SPCS2-204, Transcript of signal peptidase complex subunit 2, humanhuman

TSL 5

Gene SPCS2, Length 321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2-204ENST00000527225 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
SPCS2-204ENST00000527225 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
SPCS2-204ENST00000527225 ABCC9O60706 1549 aa37.12■■■■□ 3.53
SPCS2-204ENST00000527225 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
SPCS2-204ENST00000527225 NACADO15069 1562 aa35.48■■■■□ 3.27
SPCS2-204ENST00000527225 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
SPCS2-204ENST00000527225 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
SPCS2-204ENST00000527225 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
SPCS2-204ENST00000527225 DCAF1Q9Y4B6 1507 aa34.87■■■■□ 3.17
SPCS2-204ENST00000527225 UNC13AQ9UPW8 1703 aa34.86■■■■□ 3.17
SPCS2-204ENST00000527225 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
SPCS2-204ENST00000527225 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
SPCS2-204ENST00000527225 DNAJC5BQ9UF47 199 aa34.35■■■■□ 3.09
SPCS2-204ENST00000527225 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
SPCS2-204ENST00000527225 SHROOM4Q9ULL8 1493 aa34.14■■■■□ 3.06
SPCS2-204ENST00000527225 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
SPCS2-204ENST00000527225 CC2D2AQ9P2K1 1620 aa33.6■■■□□ 2.97
SPCS2-204ENST00000527225 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
SPCS2-204ENST00000527225 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
SPCS2-204ENST00000527225 NCAPD3P42695 1498 aa32.71■■■□□ 2.83
SPCS2-204ENST00000527225 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.83
SPCS2-204ENST00000527225 ATAD2BQ9ULI0 1458 aa32.67■■■□□ 2.82
SPCS2-204ENST00000527225 SMARCA2P51531 1590 aa32.65■■■□□ 2.82
SPCS2-204ENST00000527225 HMGXB3Q12766 1538 aa32.55■■■□□ 2.8
SPCS2-204ENST00000527225 PEG3Q9GZU2 1588 aa32.48■■■□□ 2.79
SPCS2-204ENST00000527225 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
SPCS2-204ENST00000527225 BAZ1BQ9UIG0 1483 aaKnown RBP32.4■■■□□ 2.78
SPCS2-204ENST00000527225 WIZO95785 1651 aa32.13■■■□□ 2.73
SPCS2-204ENST00000527225 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
SPCS2-204ENST00000527225 NESP48681 1621 aa32.02■■■□□ 2.72
SPCS2-204ENST00000527225 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
SPCS2-204ENST00000527225 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
SPCS2-204ENST00000527225 CUX2O14529 1486 aa31.84■■■□□ 2.69
SPCS2-204ENST00000527225 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
SPCS2-204ENST00000527225 CADPSQ9ULU8 1353 aa31.73■■■□□ 2.67
SPCS2-204ENST00000527225 PDS5BQ9NTI5 1447 aa31.71■■■□□ 2.67
SPCS2-204ENST00000527225 KIF21AQ7Z4S6 1674 aa31.7■■■□□ 2.67
SPCS2-204ENST00000527225 THOC2Q8NI27 1593 aaKnown RBP31.65■■■□□ 2.66
SPCS2-204ENST00000527225 CFTRP13569 1480 aa31.48■■■□□ 2.63
SPCS2-204ENST00000527225 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
SPCS2-204ENST00000527225 FANCD2Q9BXW9 1451 aa31.38■■■□□ 2.61
SPCS2-204ENST00000527225 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
SPCS2-204ENST00000527225 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
SPCS2-204ENST00000527225 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
SPCS2-204ENST00000527225 WDR62O43379 1518 aa31.32■■■□□ 2.6
SPCS2-204ENST00000527225 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
SPCS2-204ENST00000527225 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
SPCS2-204ENST00000527225 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
SPCS2-204ENST00000527225 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
SPCS2-204ENST00000527225 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
SPCS2-204ENST00000527225 DNMBPQ6XZF7 1577 aa30.8■■■□□ 2.52
SPCS2-204ENST00000527225 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
SPCS2-204ENST00000527225 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
SPCS2-204ENST00000527225 POLA1P09884 1462 aaPredicted RBP30.56■■■□□ 2.48
SPCS2-204ENST00000527225 TARBP1Q13395 1621 aaKnown RBP30.55■■■□□ 2.48
SPCS2-204ENST00000527225 EIF4G3O43432 1585 aaKnown RBP30.51■■■□□ 2.47
SPCS2-204ENST00000527225 CUX1P39880 1505 aa30.48■■■□□ 2.47
SPCS2-204ENST00000527225 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
SPCS2-204ENST00000527225 FGD5Q6ZNL6 1462 aa30.43■■■□□ 2.46
SPCS2-204ENST00000527225 SOGA1O94964 1423 aa30.41■■■□□ 2.46
SPCS2-204ENST00000527225 RAD54L2Q9Y4B4 1467 aa30.41■■■□□ 2.46
SPCS2-204ENST00000527225 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.469e-7■■■■□ 25
SPCS2-204ENST00000527225 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
SPCS2-204ENST00000527225 TDRD9Q8NDG6 1382 aaKnown RBP30.27■■■□□ 2.44
SPCS2-204ENST00000527225 CHD1O14646 1710 aa30.23■■■□□ 2.43
SPCS2-204ENST00000527225 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
SPCS2-204ENST00000527225 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
SPCS2-204ENST00000527225 WRNQ14191 1432 aaPredicted RBP eCLIP30.14■■■□□ 2.42
SPCS2-204ENST00000527225 ABCA10Q8WWZ4 1543 aa30.12■■■□□ 2.41
SPCS2-204ENST00000527225 GRIN2BQ13224 1484 aa30.12■■■□□ 2.41
SPCS2-204ENST00000527225 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
SPCS2-204ENST00000527225 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
SPCS2-204ENST00000527225 FBLN2P98095 1184 aa30.09■■■□□ 2.41
SPCS2-204ENST00000527225 PBRM1Q86U86 1689 aa30.09■■■□□ 2.41
SPCS2-204ENST00000527225 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
SPCS2-204ENST00000527225 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
SPCS2-204ENST00000527225 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
SPCS2-204ENST00000527225 TRIM41Q8WV44 630 aa30.04■■■□□ 2.4
SPCS2-204ENST00000527225 RIMBP3CA6NJZ7 1639 aa30.02■■■□□ 2.4
SPCS2-204ENST00000527225 RIMBP3BA6NNM3 1639 aa30.02■■■□□ 2.4
SPCS2-204ENST00000527225 RIMBP3Q9UFD9 1639 aa30.02■■■□□ 2.4
SPCS2-204ENST00000527225 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
SPCS2-204ENST00000527225 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
SPCS2-204ENST00000527225 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
SPCS2-204ENST00000527225 CLASP1Q7Z460 1538 aa29.85■■■□□ 2.37
SPCS2-204ENST00000527225 ADAMTS12P58397 1594 aa29.79■■■□□ 2.36
SPCS2-204ENST00000527225 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
SPCS2-204ENST00000527225 GRIN2AQ12879 1464 aa29.73■■■□□ 2.35
SPCS2-204ENST00000527225 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
SPCS2-204ENST00000527225 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
SPCS2-204ENST00000527225 CYB5RLQ6IPT4 315 aa29.67■■■□□ 2.34
SPCS2-204ENST00000527225 NUP160Q12769 1436 aa29.61■■■□□ 2.33
SPCS2-204ENST00000527225 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
SPCS2-204ENST00000527225 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
SPCS2-204ENST00000527225 CUL7Q14999 1698 aa29.47■■■□□ 2.31
SPCS2-204ENST00000527225 IGF1RP08069 1367 aa29.46■■■□□ 2.31
SPCS2-204ENST00000527225 SHROOM2Q13796 1616 aa29.45■■■□□ 2.31
SPCS2-204ENST00000527225 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.3
SPCS2-204ENST00000527225 RUSC2Q8N2Y8 1516 aa29.35■■■□□ 2.29
SPCS2-204ENST00000527225 CARMIL1Q5VZK9 1371 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms