RNA–Protein interactions for RNA: ENST00000503867.1

PDS5A-204, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 2

Gene PDS5A, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-204ENST00000503867 AEBP2Q6ZN18 517 aaPredicted RBP24.9■■□□□ 1.58
PDS5A-204ENST00000503867 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
PDS5A-204ENST00000503867 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
PDS5A-204ENST00000503867 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
PDS5A-204ENST00000503867 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
PDS5A-204ENST00000503867 FOXD1Q16676 465 aa20.06■□□□□ 0.8
PDS5A-204ENST00000503867 MSH5O43196 834 aa19.2■□□□□ 0.66
PDS5A-204ENST00000503867 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
PDS5A-204ENST00000503867 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
PDS5A-204ENST00000503867 ADRA2BP18089 450 aa17.83■□□□□ 0.44
PDS5A-204ENST00000503867 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
PDS5A-204ENST00000503867 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
PDS5A-204ENST00000503867 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
PDS5A-204ENST00000503867 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
PDS5A-204ENST00000503867 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
PDS5A-204ENST00000503867 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
PDS5A-204ENST00000503867 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
PDS5A-204ENST00000503867 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
PDS5A-204ENST00000503867 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
PDS5A-204ENST00000503867 POTEHQ6S545 545 aa15.75■□□□□ 0.11
PDS5A-204ENST00000503867 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
PDS5A-204ENST00000503867 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
PDS5A-204ENST00000503867 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
PDS5A-204ENST00000503867 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
PDS5A-204ENST00000503867 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
PDS5A-204ENST00000503867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -02e-8■■□□□ 14.2
PDS5A-204ENST00000503867 DSG3P32926 999 aa14.9□□□□□ -0.02
PDS5A-204ENST00000503867 CAPN15O75808 1086 aa14.68□□□□□ -0.06
PDS5A-204ENST00000503867 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
PDS5A-204ENST00000503867 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
PDS5A-204ENST00000503867 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
PDS5A-204ENST00000503867 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
PDS5A-204ENST00000503867 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
PDS5A-204ENST00000503867 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
PDS5A-204ENST00000503867 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
PDS5A-204ENST00000503867 ABCB7O75027 752 aa14.24□□□□□ -0.13
PDS5A-204ENST00000503867 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
PDS5A-204ENST00000503867 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
PDS5A-204ENST00000503867 APLP2Q06481 763 aa14.18□□□□□ -0.14
PDS5A-204ENST00000503867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
PDS5A-204ENST00000503867 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
PDS5A-204ENST00000503867 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
PDS5A-204ENST00000503867 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
PDS5A-204ENST00000503867 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
PDS5A-204ENST00000503867 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
PDS5A-204ENST00000503867 HAX1O00165 279 aa13.71□□□□□ -0.21
PDS5A-204ENST00000503867 POLA2Q14181 598 aa13.63□□□□□ -0.23
PDS5A-204ENST00000503867 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
PDS5A-204ENST00000503867 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDS5A-204ENST00000503867 EVX2Q03828 476 aa13.48□□□□□ -0.25
PDS5A-204ENST00000503867 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
PDS5A-204ENST00000503867 LHX8Q68G74 356 aa13.39□□□□□ -0.27
PDS5A-204ENST00000503867 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
PDS5A-204ENST00000503867 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
PDS5A-204ENST00000503867 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
PDS5A-204ENST00000503867 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
PDS5A-204ENST00000503867 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
PDS5A-204ENST00000503867 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
PDS5A-204ENST00000503867 GABBR2O75899 941 aa13.15□□□□□ -0.3
PDS5A-204ENST00000503867 KCNA4P22459 653 aa13.11□□□□□ -0.31
PDS5A-204ENST00000503867 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
PDS5A-204ENST00000503867 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
PDS5A-204ENST00000503867 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
PDS5A-204ENST00000503867 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
PDS5A-204ENST00000503867 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
PDS5A-204ENST00000503867 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
PDS5A-204ENST00000503867 ABCC9O60706 1549 aa12.84□□□□□ -0.35
PDS5A-204ENST00000503867 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
PDS5A-204ENST00000503867 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
PDS5A-204ENST00000503867 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
PDS5A-204ENST00000503867 CLCN6P51797 869 aa12.73□□□□□ -0.37
PDS5A-204ENST00000503867 ZCCHC6Q5VYS8 1495 aaKnown RBP12.68□□□□□ -0.38
PDS5A-204ENST00000503867 POTEMA6NI47 508 aa12.66□□□□□ -0.38
PDS5A-204ENST00000503867 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
PDS5A-204ENST00000503867 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
PDS5A-204ENST00000503867 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
PDS5A-204ENST00000503867 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
PDS5A-204ENST00000503867 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
PDS5A-204ENST00000503867 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
PDS5A-204ENST00000503867 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
PDS5A-204ENST00000503867 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
PDS5A-204ENST00000503867 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
PDS5A-204ENST00000503867 FBLN2P98095 1184 aa12.56□□□□□ -0.4
PDS5A-204ENST00000503867 NACADO15069 1562 aa12.52□□□□□ -0.4
PDS5A-204ENST00000503867 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
PDS5A-204ENST00000503867 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
PDS5A-204ENST00000503867 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
PDS5A-204ENST00000503867 ZNF692Q9BU19 519 aaPredicted RBP12.47□□□□□ -0.41
PDS5A-204ENST00000503867 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
PDS5A-204ENST00000503867 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
PDS5A-204ENST00000503867 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
PDS5A-204ENST00000503867 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
PDS5A-204ENST00000503867 ATXN8OSP0DMR3 200 aa12.35□□□□□ -0.43
PDS5A-204ENST00000503867 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
PDS5A-204ENST00000503867 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDS5A-204ENST00000503867 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
PDS5A-204ENST00000503867 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
PDS5A-204ENST00000503867 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
PDS5A-204ENST00000503867 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
PDS5A-204ENST00000503867 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms