Protein–RNA interactions for Protein: Q8NEG0

FAM71C, Protein FAM71C, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71CQ8NEG0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FAM71CQ8NEG0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 KRT18P65-201ENST00000439811 1286 ntBASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 SPDYE13P-201ENST00000445314 798 ntBASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 AC083849.1-201ENST00000615227 514 ntBASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FAM71CQ8NEG0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 HTR7P1-202ENST00000624664 4411 ntBASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 IGHGP-201ENST00000390555 1178 ntBASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 VENTXP5-201ENST00000523979 775 ntBASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM71CQ8NEG0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms