Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 HEIH-201ENST00000623091 1652 ntBASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV20-1A0A075B6N2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
TRBV20-1A0A075B6N2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 AC104581.4-201ENST00000623126 3052 ntBASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 AC103834.1-201ENST00000520383 144 ntBASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 AC008556.1-201ENST00000610908 2040 ntBASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TRBV20-1A0A075B6N2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms