Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 AC116407.4-201ENST00000623319 1061 ntBASIC19.73■□□□□ 0.75
L1RE1Q9UN81 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 AC012317.2-201ENST00000623305 2251 ntBASIC19.73■□□□□ 0.75
L1RE1Q9UN81 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 AC080080.1-201ENST00000625121 2420 ntBASIC19.73■□□□□ 0.75
L1RE1Q9UN81 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
L1RE1Q9UN81 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 IER3-202ENST00000376377 1350 ntBASIC19.72■□□□□ 0.75
L1RE1Q9UN81 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 AL163051.1-201ENST00000569214 1512 ntBASIC19.72■□□□□ 0.75
L1RE1Q9UN81 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 PVRIG2P-201ENST00000435460 978 ntBASIC19.72■□□□□ 0.75
L1RE1Q9UN81 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 AC084018.2-201ENST00000613093 2607 ntBASIC19.72■□□□□ 0.75
L1RE1Q9UN81 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
L1RE1Q9UN81 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 AC099343.3-201ENST00000605834 2503 ntBASIC19.71■□□□□ 0.75
L1RE1Q9UN81 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
L1RE1Q9UN81 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 AC112777.1-201ENST00000540175 1423 ntBASIC19.7■□□□□ 0.74
L1RE1Q9UN81 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 AL645929.1-201ENST00000420084 975 ntBASIC19.7■□□□□ 0.74
L1RE1Q9UN81 SLC25A6P5-201ENST00000435663 894 ntBASIC19.7■□□□□ 0.74
L1RE1Q9UN81 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.7■□□□□ 0.74
L1RE1Q9UN81 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.7■□□□□ 0.74
L1RE1Q9UN81 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms