Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 CSPG4P11-201ENST00000560634 4910 ntBASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 BX664725.1-201ENST00000438252 379 ntBASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 AP005435.1-201ENST00000529293 1178 ntBASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 AC092171.4-201ENST00000609130 632 ntBASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SPTSSBQ8NFR3 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
SPTSSBQ8NFR3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 AC007686.3-201ENST00000619017 3487 ntBASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.89□□□□□ -0.83
SPTSSBQ8NFR3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms