RNA–Protein interactions for RNA: ENST00000389554.7

TBR1-201, Transcript of T-box, brain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBR1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBR1-201ENST00000389554 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
TBR1-201ENST00000389554 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
TBR1-201ENST00000389554 MYT1Q01538 1121 aa21.86■■□□□ 1.09
TBR1-201ENST00000389554 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
TBR1-201ENST00000389554 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.02
TBR1-201ENST00000389554 HRCP23327 699 aa21.36■■□□□ 1.01
TBR1-201ENST00000389554 PPARGC1BQ86YN6 1023 aaKnown RBP21.27■■□□□ 1
TBR1-201ENST00000389554 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
TBR1-201ENST00000389554 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
TBR1-201ENST00000389554 CENPBP07199 599 aaPredicted RBP20.67■□□□□ 0.9
TBR1-201ENST00000389554 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
TBR1-201ENST00000389554 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
TBR1-201ENST00000389554 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
TBR1-201ENST00000389554 ZEB1P37275 1124 aaPredicted RBP20.32■□□□□ 0.84
TBR1-201ENST00000389554 TTBK1Q5TCY1 1321 aaPredicted RBP20.31■□□□□ 0.84
TBR1-201ENST00000389554 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
TBR1-201ENST00000389554 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
TBR1-201ENST00000389554 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
TBR1-201ENST00000389554 NEUROD1Q13562 356 aa20.02■□□□□ 0.79
TBR1-201ENST00000389554 ERICH6Q7L0X2 663 aa20■□□□□ 0.79
TBR1-201ENST00000389554 TRIM26Q12899 539 aaPredicted RBP19.98■□□□□ 0.79
TBR1-201ENST00000389554 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
TBR1-201ENST00000389554 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
TBR1-201ENST00000389554 LOC105371045A0A1W2PR82 267 aa19.7■□□□□ 0.74
TBR1-201ENST00000389554 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
TBR1-201ENST00000389554 PRKCSHP14314 528 aaPredicted RBP19.63■□□□□ 0.73
TBR1-201ENST00000389554 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
TBR1-201ENST00000389554 ANP32EQ9BTT0 268 aa19.54■□□□□ 0.72
TBR1-201ENST00000389554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
TBR1-201ENST00000389554 BCANQ96GW7 911 aa19.42■□□□□ 0.7
TBR1-201ENST00000389554 NEFLP07196 543 aa19.34■□□□□ 0.69
TBR1-201ENST00000389554 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.69
TBR1-201ENST00000389554 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
TBR1-201ENST00000389554 EIF5BO60841 1220 aaKnown RBP19.19■□□□□ 0.66
TBR1-201ENST00000389554 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
TBR1-201ENST00000389554 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.63
TBR1-201ENST00000389554 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
TBR1-201ENST00000389554 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
TBR1-201ENST00000389554 MIER1Q8N108 512 aa18.9■□□□□ 0.62
TBR1-201ENST00000389554 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
TBR1-201ENST00000389554 NBR1Q14596 966 aa18.86■□□□□ 0.61
TBR1-201ENST00000389554 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
TBR1-201ENST00000389554 TSHZ2Q9NRE2 1034 aa18.83■□□□□ 0.6
TBR1-201ENST00000389554 FKBP8Q14318 412 aa18.83■□□□□ 0.6
TBR1-201ENST00000389554 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
TBR1-201ENST00000389554 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
TBR1-201ENST00000389554 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
TBR1-201ENST00000389554 ITGAEP38570 1179 aa18.77■□□□□ 0.6
TBR1-201ENST00000389554 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
TBR1-201ENST00000389554 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
TBR1-201ENST00000389554 DEKP35659 375 aaKnown RBP18.7■□□□□ 0.58
TBR1-201ENST00000389554 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
TBR1-201ENST00000389554 CLSPNQ9HAW4 1339 aa18.67■□□□□ 0.58
TBR1-201ENST00000389554 MYT1LQ9UL68 1186 aa18.66■□□□□ 0.58
TBR1-201ENST00000389554 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
TBR1-201ENST00000389554 RBM19Q9Y4C8 960 aaKnown RBP18.59■□□□□ 0.57
TBR1-201ENST00000389554 APLP2Q06481 763 aa18.58■□□□□ 0.56
TBR1-201ENST00000389554 GLIPR1L2Q4G1C9 344 aa18.54■□□□□ 0.56
TBR1-201ENST00000389554 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
TBR1-201ENST00000389554 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
TBR1-201ENST00000389554 ABCC9O60706 1549 aa18.45■□□□□ 0.54
TBR1-201ENST00000389554 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.54
TBR1-201ENST00000389554 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
TBR1-201ENST00000389554 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
TBR1-201ENST00000389554 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
TBR1-201ENST00000389554 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.53
TBR1-201ENST00000389554 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.53
TBR1-201ENST00000389554 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
TBR1-201ENST00000389554 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
TBR1-201ENST00000389554 PKNOX2Q96KN3 472 aa18.27■□□□□ 0.51
TBR1-201ENST00000389554 ZBTB47Q9UFB7 747 aaPredicted RBP18.23■□□□□ 0.51
TBR1-201ENST00000389554 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
TBR1-201ENST00000389554 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
TBR1-201ENST00000389554 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
TBR1-201ENST00000389554 NOP58Q9Y2X3 529 aaKnown RBP18.15■□□□□ 0.5
TBR1-201ENST00000389554 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
TBR1-201ENST00000389554 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.5
TBR1-201ENST00000389554 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
TBR1-201ENST00000389554 IL27Q8NEV9 243 aa18.12■□□□□ 0.49
TBR1-201ENST00000389554 NEFMP07197 916 aa18.12■□□□□ 0.49
TBR1-201ENST00000389554 UBE2Q2Q8WVN8 375 aa18.09■□□□□ 0.49
TBR1-201ENST00000389554 ANP32CO43423 234 aa18.07■□□□□ 0.48
TBR1-201ENST00000389554 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
TBR1-201ENST00000389554 ARXQ96QS3 562 aa18.05■□□□□ 0.48
TBR1-201ENST00000389554 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
TBR1-201ENST00000389554 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
TBR1-201ENST00000389554 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
TBR1-201ENST00000389554 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
TBR1-201ENST00000389554 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
TBR1-201ENST00000389554 MSH5O43196 834 aa17.97■□□□□ 0.47
TBR1-201ENST00000389554 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
TBR1-201ENST00000389554 NAP1L5Q96NT1 182 aaPredicted RBP17.93■□□□□ 0.46
TBR1-201ENST00000389554 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
TBR1-201ENST00000389554 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
TBR1-201ENST00000389554 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
TBR1-201ENST00000389554 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
TBR1-201ENST00000389554 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
TBR1-201ENST00000389554 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
TBR1-201ENST00000389554 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
TBR1-201ENST00000389554 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms