Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.25■■■■□ 3.71
CDC42BPBQ9Y5S2 MIR3960-201ENST00000583311 91 ntBASIC38.25■■■■□ 3.71
CDC42BPBQ9Y5S2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 MIR6765-201ENST00000614092 87 ntBASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 KRT8P33-201ENST00000508125 1423 ntBASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.24■■■■□ 3.71
CDC42BPBQ9Y5S2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CDC42BPBQ9Y5S2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CDC42BPBQ9Y5S2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CDC42BPBQ9Y5S2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
CDC42BPBQ9Y5S2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.22■■■■□ 3.71
CDC42BPBQ9Y5S2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC38.22■■■■□ 3.71
CDC42BPBQ9Y5S2 AP002414.2-202ENST00000590929 1450 ntBASIC38.21■■■■□ 3.71
CDC42BPBQ9Y5S2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.21■■■■□ 3.71
CDC42BPBQ9Y5S2 MIR4508-201ENST00000584178 70 ntBASIC38.21■■■■□ 3.71
CDC42BPBQ9Y5S2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
CDC42BPBQ9Y5S2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CDC42BPBQ9Y5S2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CDC42BPBQ9Y5S2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC38.2■■■■□ 3.71
CDC42BPBQ9Y5S2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.19■■■■□ 3.7
CDC42BPBQ9Y5S2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
CDC42BPBQ9Y5S2 ABCB10P3-201ENST00000561950 2166 ntBASIC38.19■■■■□ 3.7
CDC42BPBQ9Y5S2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
CDC42BPBQ9Y5S2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CDC42BPBQ9Y5S2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC38.18■■■■□ 3.7
CDC42BPBQ9Y5S2 AC103834.1-201ENST00000520383 144 ntBASIC38.18■■■■□ 3.7
CDC42BPBQ9Y5S2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.18■■■■□ 3.7
CDC42BPBQ9Y5S2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.18■■■■□ 3.7
CDC42BPBQ9Y5S2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
CDC42BPBQ9Y5S2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC38.16■■■■□ 3.7
CDC42BPBQ9Y5S2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC38.16■■■■□ 3.7
CDC42BPBQ9Y5S2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.15■■■■□ 3.7
CDC42BPBQ9Y5S2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CDC42BPBQ9Y5S2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.15■■■■□ 3.7
CDC42BPBQ9Y5S2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.14■■■■□ 3.7
CDC42BPBQ9Y5S2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.7
CDC42BPBQ9Y5S2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.7
CDC42BPBQ9Y5S2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.7
CDC42BPBQ9Y5S2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC38.13■■■■□ 3.69
CDC42BPBQ9Y5S2 AC139795.1-202ENST00000500444 432 ntBASIC38.13■■■■□ 3.69
CDC42BPBQ9Y5S2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.13■■■■□ 3.69
CDC42BPBQ9Y5S2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 AC103724.3-201ENST00000564481 992 ntBASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 AC074183.2-201ENST00000623112 922 ntBASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CDC42BPBQ9Y5S2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDC42BPBQ9Y5S2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDC42BPBQ9Y5S2 AL592295.1-201ENST00000400984 884 ntBASIC38.11■■■■□ 3.69
CDC42BPBQ9Y5S2 AL139393.2-201ENST00000608721 2025 ntBASIC38.09■■■■□ 3.69
CDC42BPBQ9Y5S2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC38.09■■■■□ 3.69
CDC42BPBQ9Y5S2 GUSBP5-201ENST00000418136 578 ntBASIC38.08■■■■□ 3.69
CDC42BPBQ9Y5S2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
CDC42BPBQ9Y5S2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
CDC42BPBQ9Y5S2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC38.07■■■■□ 3.69
CDC42BPBQ9Y5S2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC38.07■■■■□ 3.69
CDC42BPBQ9Y5S2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.07■■■■□ 3.69
CDC42BPBQ9Y5S2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC38.07■■■■□ 3.68
CDC42BPBQ9Y5S2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC38.07■■■■□ 3.68
CDC42BPBQ9Y5S2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
CDC42BPBQ9Y5S2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC38.07■■■■□ 3.68
CDC42BPBQ9Y5S2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC38.06■■■■□ 3.68
CDC42BPBQ9Y5S2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC38.06■■■■□ 3.68
CDC42BPBQ9Y5S2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CDC42BPBQ9Y5S2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CDC42BPBQ9Y5S2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
CDC42BPBQ9Y5S2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
CDC42BPBQ9Y5S2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC38.05■■■■□ 3.68
CDC42BPBQ9Y5S2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 HES6-204ENST00000409182 863 ntTSL 2 BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC38.04■■■■□ 3.68
CDC42BPBQ9Y5S2 AL359504.2-201ENST00000605506 1601 ntBASIC38.03■■■■□ 3.68
CDC42BPBQ9Y5S2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC38.03■■■■□ 3.68
CDC42BPBQ9Y5S2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDC42BPBQ9Y5S2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDC42BPBQ9Y5S2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDC42BPBQ9Y5S2 HYI-210ENST00000486909 905 ntTSL 5 BASIC38.02■■■■□ 3.68
CDC42BPBQ9Y5S2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC38.02■■■■□ 3.68
CDC42BPBQ9Y5S2 BHLHE23-202ENST00000612929 1109 ntBASIC38.01■■■■□ 3.68
CDC42BPBQ9Y5S2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC38.01■■■■□ 3.68
CDC42BPBQ9Y5S2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.67
CDC42BPBQ9Y5S2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC38■■■■□ 3.67
CDC42BPBQ9Y5S2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC37.99■■■■□ 3.67
CDC42BPBQ9Y5S2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CDC42BPBQ9Y5S2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC37.98■■■■□ 3.67
CDC42BPBQ9Y5S2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
CDC42BPBQ9Y5S2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC37.97■■■■□ 3.67
CDC42BPBQ9Y5S2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC37.97■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms