Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 DUX4L28-201ENST00000623687 678 ntBASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXJ3Q9UPW0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXJ3Q9UPW0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXJ3Q9UPW0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXJ3Q9UPW0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
FOXJ3Q9UPW0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
FOXJ3Q9UPW0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXJ3Q9UPW0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXJ3Q9UPW0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXJ3Q9UPW0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
FOXJ3Q9UPW0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
FOXJ3Q9UPW0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.47■■□□□ 1.03
FOXJ3Q9UPW0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXJ3Q9UPW0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXJ3Q9UPW0 AC087741.3-201ENST00000624270 1347 ntBASIC21.46■■□□□ 1.03
FOXJ3Q9UPW0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXJ3Q9UPW0 AC142472.1-201ENST00000612013 1741 ntBASIC21.46■■□□□ 1.03
FOXJ3Q9UPW0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
FOXJ3Q9UPW0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXJ3Q9UPW0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXJ3Q9UPW0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXJ3Q9UPW0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXJ3Q9UPW0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXJ3Q9UPW0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXJ3Q9UPW0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.42■■□□□ 1.02
FOXJ3Q9UPW0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXJ3Q9UPW0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXJ3Q9UPW0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXJ3Q9UPW0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXJ3Q9UPW0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
FOXJ3Q9UPW0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
FOXJ3Q9UPW0 AC110285.7-201ENST00000624417 1536 ntBASIC21.39■■□□□ 1.02
FOXJ3Q9UPW0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.39■■□□□ 1.02
FOXJ3Q9UPW0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXJ3Q9UPW0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXJ3Q9UPW0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXJ3Q9UPW0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXJ3Q9UPW0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 WHAMMP3-201ENST00000611636 1609 ntBASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXJ3Q9UPW0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXJ3Q9UPW0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXJ3Q9UPW0 AC044849.2-201ENST00000606596 710 ntBASIC21.37■■□□□ 1.01
FOXJ3Q9UPW0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXJ3Q9UPW0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
FOXJ3Q9UPW0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXJ3Q9UPW0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXJ3Q9UPW0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXJ3Q9UPW0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXJ3Q9UPW0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXJ3Q9UPW0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXJ3Q9UPW0 ABHD17AP4-201ENST00000411545 909 ntBASIC21.35■■□□□ 1.01
FOXJ3Q9UPW0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FOXJ3Q9UPW0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXJ3Q9UPW0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms