Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CRAMP1Q96RY5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CRAMP1Q96RY5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.85■■■□□ 2.53
CRAMP1Q96RY5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.85■■■□□ 2.53
CRAMP1Q96RY5 MIR6765-201ENST00000614092 87 ntBASIC30.85■■■□□ 2.53
CRAMP1Q96RY5 ABCB10P3-201ENST00000561950 2166 ntBASIC30.85■■■□□ 2.53
CRAMP1Q96RY5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CRAMP1Q96RY5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CRAMP1Q96RY5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CRAMP1Q96RY5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CRAMP1Q96RY5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.83■■■□□ 2.53
CRAMP1Q96RY5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CRAMP1Q96RY5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
CRAMP1Q96RY5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.82■■■□□ 2.52
CRAMP1Q96RY5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CRAMP1Q96RY5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CRAMP1Q96RY5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CRAMP1Q96RY5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
CRAMP1Q96RY5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.81■■■□□ 2.52
CRAMP1Q96RY5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CRAMP1Q96RY5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CRAMP1Q96RY5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CRAMP1Q96RY5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CRAMP1Q96RY5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.79■■■□□ 2.52
CRAMP1Q96RY5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CRAMP1Q96RY5 AC103834.1-201ENST00000520383 144 ntBASIC30.79■■■□□ 2.52
CRAMP1Q96RY5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
CRAMP1Q96RY5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 AC139795.1-202ENST00000500444 432 ntBASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 KRT8P33-201ENST00000508125 1423 ntBASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CRAMP1Q96RY5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 PVT1_1.1-201ENST00000615125 194 ntBASIC30.77■■■□□ 2.52
CRAMP1Q96RY5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CRAMP1Q96RY5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CRAMP1Q96RY5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.76■■■□□ 2.51
CRAMP1Q96RY5 AC018755.3-202ENST00000596210 929 ntBASIC30.76■■■□□ 2.51
CRAMP1Q96RY5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
CRAMP1Q96RY5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CRAMP1Q96RY5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CRAMP1Q96RY5 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.75■■■□□ 2.51
CRAMP1Q96RY5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.75■■■□□ 2.51
CRAMP1Q96RY5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CRAMP1Q96RY5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 AC009299.2-201ENST00000482477 511 ntBASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
CRAMP1Q96RY5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.73■■■□□ 2.51
CRAMP1Q96RY5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.73■■■□□ 2.51
CRAMP1Q96RY5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CRAMP1Q96RY5 YBX1P4-201ENST00000392794 808 ntBASIC30.72■■■□□ 2.51
CRAMP1Q96RY5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CRAMP1Q96RY5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.71■■■□□ 2.51
CRAMP1Q96RY5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CRAMP1Q96RY5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CRAMP1Q96RY5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CRAMP1Q96RY5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.71■■■□□ 2.51
CRAMP1Q96RY5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
CRAMP1Q96RY5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CRAMP1Q96RY5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.7■■■□□ 2.51
CRAMP1Q96RY5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.7■■■□□ 2.51
CRAMP1Q96RY5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CRAMP1Q96RY5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CRAMP1Q96RY5 AL359504.2-201ENST00000605506 1601 ntBASIC30.69■■■□□ 2.5
CRAMP1Q96RY5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CRAMP1Q96RY5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CRAMP1Q96RY5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.68■■■□□ 2.5
CRAMP1Q96RY5 MIR4508-201ENST00000584178 70 ntBASIC30.68■■■□□ 2.5
CRAMP1Q96RY5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CRAMP1Q96RY5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CRAMP1Q96RY5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.67■■■□□ 2.5
CRAMP1Q96RY5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CRAMP1Q96RY5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.66■■■□□ 2.5
CRAMP1Q96RY5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CRAMP1Q96RY5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CRAMP1Q96RY5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.65■■■□□ 2.5
CRAMP1Q96RY5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CRAMP1Q96RY5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.65■■■□□ 2.5
CRAMP1Q96RY5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CRAMP1Q96RY5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CRAMP1Q96RY5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CRAMP1Q96RY5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CRAMP1Q96RY5 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.64■■■□□ 2.5
CRAMP1Q96RY5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.64■■■□□ 2.5
CRAMP1Q96RY5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
CRAMP1Q96RY5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CRAMP1Q96RY5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms