Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
NPAS4Q8IUM7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
NPAS4Q8IUM7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.93■■□□□ 1.9
NPAS4Q8IUM7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.92■■□□□ 1.9
NPAS4Q8IUM7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
NPAS4Q8IUM7 BHLHE23-202ENST00000612929 1109 ntBASIC26.92■■□□□ 1.9
NPAS4Q8IUM7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
NPAS4Q8IUM7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NPAS4Q8IUM7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NPAS4Q8IUM7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
NPAS4Q8IUM7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NPAS4Q8IUM7 AC074183.2-201ENST00000623112 922 ntBASIC26.91■■□□□ 1.9
NPAS4Q8IUM7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NPAS4Q8IUM7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
NPAS4Q8IUM7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
NPAS4Q8IUM7 AL451085.2-201ENST00000605085 799 ntBASIC26.9■■□□□ 1.9
NPAS4Q8IUM7 AL035685.1-201ENST00000636663 812 ntBASIC26.9■■□□□ 1.9
NPAS4Q8IUM7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NPAS4Q8IUM7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NPAS4Q8IUM7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.89■■□□□ 1.9
NPAS4Q8IUM7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
NPAS4Q8IUM7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NPAS4Q8IUM7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
NPAS4Q8IUM7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NPAS4Q8IUM7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.88■■□□□ 1.89
NPAS4Q8IUM7 AC010980.1-201ENST00000587192 1142 ntBASIC26.88■■□□□ 1.89
NPAS4Q8IUM7 MIR6765-201ENST00000614092 87 ntBASIC26.88■■□□□ 1.89
NPAS4Q8IUM7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
NPAS4Q8IUM7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NPAS4Q8IUM7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
NPAS4Q8IUM7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NPAS4Q8IUM7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
NPAS4Q8IUM7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NPAS4Q8IUM7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.85■■□□□ 1.89
NPAS4Q8IUM7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NPAS4Q8IUM7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 AC139795.1-202ENST00000500444 432 ntBASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NPAS4Q8IUM7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.83■■□□□ 1.89
NPAS4Q8IUM7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
NPAS4Q8IUM7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NPAS4Q8IUM7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NPAS4Q8IUM7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 AC018755.3-202ENST00000596210 929 ntBASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.82■■□□□ 1.88
NPAS4Q8IUM7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.81■■□□□ 1.88
NPAS4Q8IUM7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 KRT8P33-201ENST00000508125 1423 ntBASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NPAS4Q8IUM7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
NPAS4Q8IUM7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.79■■□□□ 1.88
NPAS4Q8IUM7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NPAS4Q8IUM7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.79■■□□□ 1.88
NPAS4Q8IUM7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
NPAS4Q8IUM7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.78■■□□□ 1.88
NPAS4Q8IUM7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.78■■□□□ 1.88
NPAS4Q8IUM7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NPAS4Q8IUM7 AL359504.2-201ENST00000605506 1601 ntBASIC26.78■■□□□ 1.88
NPAS4Q8IUM7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.78■■□□□ 1.88
NPAS4Q8IUM7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NPAS4Q8IUM7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NPAS4Q8IUM7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
NPAS4Q8IUM7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
NPAS4Q8IUM7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NPAS4Q8IUM7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.76■■□□□ 1.88
NPAS4Q8IUM7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
NPAS4Q8IUM7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.76■■□□□ 1.87
NPAS4Q8IUM7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
NPAS4Q8IUM7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.75■■□□□ 1.87
NPAS4Q8IUM7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NPAS4Q8IUM7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NPAS4Q8IUM7 YBX1P4-201ENST00000392794 808 ntBASIC26.75■■□□□ 1.87
NPAS4Q8IUM7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.74■■□□□ 1.87
NPAS4Q8IUM7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NPAS4Q8IUM7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
NPAS4Q8IUM7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
NPAS4Q8IUM7 AC103834.1-201ENST00000520383 144 ntBASIC26.73■■□□□ 1.87
NPAS4Q8IUM7 ABCB10P1-201ENST00000614297 2181 ntBASIC26.73■■□□□ 1.87
NPAS4Q8IUM7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NPAS4Q8IUM7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms