Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LCNL1Q6ZST4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LCNL1Q6ZST4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LCNL1Q6ZST4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCNL1Q6ZST4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCNL1Q6ZST4 AC126177.7-201ENST00000547904 679 ntBASIC19.41■□□□□ 0.7
LCNL1Q6ZST4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.41■□□□□ 0.7
LCNL1Q6ZST4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LCNL1Q6ZST4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.41■□□□□ 0.7
LCNL1Q6ZST4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 AC142086.6-201ENST00000621154 1765 ntBASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCNL1Q6ZST4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LCNL1Q6ZST4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LCNL1Q6ZST4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.39■□□□□ 0.69
LCNL1Q6ZST4 AL157400.5-201ENST00000507624 621 ntBASIC19.39■□□□□ 0.69
LCNL1Q6ZST4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCNL1Q6ZST4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LCNL1Q6ZST4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCNL1Q6ZST4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 AC092296.2-201ENST00000589470 999 ntBASIC19.38■□□□□ 0.69
LCNL1Q6ZST4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LCNL1Q6ZST4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LCNL1Q6ZST4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.35■□□□□ 0.69
LCNL1Q6ZST4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCNL1Q6ZST4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LCNL1Q6ZST4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LCNL1Q6ZST4 WHAMMP3-201ENST00000611636 1609 ntBASIC19.34■□□□□ 0.69
LCNL1Q6ZST4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LCNL1Q6ZST4 BX255925.1-201ENST00000566954 1854 ntBASIC19.34■□□□□ 0.69
LCNL1Q6ZST4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LCNL1Q6ZST4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCNL1Q6ZST4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LCNL1Q6ZST4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 ABHD17AP5-201ENST00000580133 923 ntBASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LCNL1Q6ZST4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCNL1Q6ZST4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCNL1Q6ZST4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCNL1Q6ZST4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LCNL1Q6ZST4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LCNL1Q6ZST4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
LCNL1Q6ZST4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.31■□□□□ 0.68
LCNL1Q6ZST4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCNL1Q6ZST4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LCNL1Q6ZST4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 ECEL1P2-201ENST00000461596 1295 ntBASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 AL449106.1-201ENST00000608517 1980 ntBASIC19.3■□□□□ 0.68
LCNL1Q6ZST4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCNL1Q6ZST4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCNL1Q6ZST4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LCNL1Q6ZST4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LCNL1Q6ZST4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.27■□□□□ 0.68
LCNL1Q6ZST4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCNL1Q6ZST4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.27■□□□□ 0.68
LCNL1Q6ZST4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCNL1Q6ZST4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCNL1Q6ZST4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.26■□□□□ 0.67
LCNL1Q6ZST4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCNL1Q6ZST4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCNL1Q6ZST4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCNL1Q6ZST4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LCNL1Q6ZST4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LCNL1Q6ZST4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 SMPD5-203ENST00000639008 1464 ntBASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 AL359504.2-201ENST00000605506 1601 ntBASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCNL1Q6ZST4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms