Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS1BP61024 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CKS1BP61024 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CKS1BP61024 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17■□□□□ 0.31
CKS1BP61024 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.99■□□□□ 0.31
CKS1BP61024 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS1BP61024 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.99■□□□□ 0.31
CKS1BP61024 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS1BP61024 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS1BP61024 LINC01003-201ENST00000564834 1764 ntBASIC16.99■□□□□ 0.31
CKS1BP61024 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CKS1BP61024 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CKS1BP61024 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CKS1BP61024 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.98■□□□□ 0.31
CKS1BP61024 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CKS1BP61024 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.98■□□□□ 0.31
CKS1BP61024 AL449106.1-201ENST00000608517 1980 ntBASIC16.98■□□□□ 0.31
CKS1BP61024 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16.97■□□□□ 0.31
CKS1BP61024 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CKS1BP61024 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CKS1BP61024 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.96■□□□□ 0.31
CKS1BP61024 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CKS1BP61024 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.95■□□□□ 0.3
CKS1BP61024 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS1BP61024 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
CKS1BP61024 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.94■□□□□ 0.3
CKS1BP61024 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CKS1BP61024 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CKS1BP61024 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 AC079834.2-201ENST00000609776 1949 ntBASIC16.94■□□□□ 0.3
CKS1BP61024 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CKS1BP61024 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CKS1BP61024 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.92■□□□□ 0.3
CKS1BP61024 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CKS1BP61024 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.91■□□□□ 0.3
CKS1BP61024 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CKS1BP61024 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 AC012676.1-201ENST00000574705 1949 ntBASIC16.91■□□□□ 0.3
CKS1BP61024 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 AL391121.1-201ENST00000607967 1349 ntBASIC16.91■□□□□ 0.3
CKS1BP61024 AC100797.4-201ENST00000631653 1827 ntBASIC16.91■□□□□ 0.3
CKS1BP61024 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.91■□□□□ 0.3
CKS1BP61024 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS1BP61024 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS1BP61024 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS1BP61024 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms