Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCN2P51788 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN2P51788 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN2P51788 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN2P51788 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN2P51788 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN2P51788 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.84■■□□□ 1.41
CLCN2P51788 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN2P51788 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN2P51788 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN2P51788 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.83■■□□□ 1.41
CLCN2P51788 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN2P51788 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.83■■□□□ 1.4
CLCN2P51788 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN2P51788 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCN2P51788 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN2P51788 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN2P51788 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCN2P51788 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN2P51788 AC100797.4-201ENST00000631653 1827 ntBASIC23.82■■□□□ 1.4
CLCN2P51788 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN2P51788 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN2P51788 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCN2P51788 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLCN2P51788 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN2P51788 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN2P51788 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN2P51788 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN2P51788 AC145676.1-201ENST00000514988 2004 ntBASIC23.79■■□□□ 1.4
CLCN2P51788 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCN2P51788 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN2P51788 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN2P51788 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN2P51788 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCN2P51788 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCN2P51788 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN2P51788 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN2P51788 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.78■■□□□ 1.4
CLCN2P51788 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN2P51788 LINC01003-201ENST00000564834 1764 ntBASIC23.78■■□□□ 1.4
CLCN2P51788 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.78■■□□□ 1.4
CLCN2P51788 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN2P51788 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CLCN2P51788 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN2P51788 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN2P51788 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CLCN2P51788 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN2P51788 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLCN2P51788 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CLCN2P51788 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN2P51788 MIR4449-201ENST00000578365 66 ntBASIC23.75■■□□□ 1.39
CLCN2P51788 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCN2P51788 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN2P51788 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CLCN2P51788 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CLCN2P51788 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN2P51788 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN2P51788 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.74■■□□□ 1.39
CLCN2P51788 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CLCN2P51788 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN2P51788 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN2P51788 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN2P51788 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN2P51788 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN2P51788 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN2P51788 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.73■■□□□ 1.39
CLCN2P51788 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN2P51788 AC110285.7-201ENST00000624417 1536 ntBASIC23.72■■□□□ 1.39
CLCN2P51788 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN2P51788 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN2P51788 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CLCN2P51788 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN2P51788 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN2P51788 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN2P51788 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.71■■□□□ 1.39
CLCN2P51788 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN2P51788 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CLCN2P51788 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.7■■□□□ 1.38
CLCN2P51788 AP002414.2-202ENST00000590929 1450 ntBASIC23.69■■□□□ 1.38
CLCN2P51788 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN2P51788 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN2P51788 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.69■■□□□ 1.38
CLCN2P51788 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
CLCN2P51788 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLCN2P51788 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CLCN2P51788 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CLCN2P51788 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
CLCN2P51788 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN2P51788 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN2P51788 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN2P51788 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN2P51788 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN2P51788 AC008813.1-201ENST00000536597 885 ntBASIC23.67■■□□□ 1.38
CLCN2P51788 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN2P51788 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLCN2P51788 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.66■■□□□ 1.38
CLCN2P51788 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLCN2P51788 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.66■■□□□ 1.38
CLCN2P51788 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLCN2P51788 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms