Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC131212.1-201ENST00000613771 668 ntBASIC31.08■■■□□ 2.57
COL11A2P13942 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL11A2P13942 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL11A2P13942 MIR4508-201ENST00000584178 70 ntBASIC31.07■■■□□ 2.56
COL11A2P13942 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.07■■■□□ 2.56
COL11A2P13942 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
COL11A2P13942 AC139795.1-202ENST00000500444 432 ntBASIC31.07■■■□□ 2.56
COL11A2P13942 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.07■■■□□ 2.56
COL11A2P13942 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.07■■■□□ 2.56
COL11A2P13942 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.06■■■□□ 2.56
COL11A2P13942 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL11A2P13942 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.06■■■□□ 2.56
COL11A2P13942 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL11A2P13942 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.04■■■□□ 2.56
COL11A2P13942 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL11A2P13942 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL11A2P13942 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL11A2P13942 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 AC103724.3-201ENST00000564481 992 ntBASIC31.04■■■□□ 2.56
COL11A2P13942 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.04■■■□□ 2.56
COL11A2P13942 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL11A2P13942 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
COL11A2P13942 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.03■■■□□ 2.56
COL11A2P13942 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
COL11A2P13942 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
COL11A2P13942 MIR3960-201ENST00000583311 91 ntBASIC31.01■■■□□ 2.56
COL11A2P13942 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.01■■■□□ 2.56
COL11A2P13942 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.56
COL11A2P13942 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.01■■■□□ 2.55
COL11A2P13942 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL11A2P13942 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31■■■□□ 2.55
COL11A2P13942 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.99■■■□□ 2.55
COL11A2P13942 BHLHE23-202ENST00000612929 1109 ntBASIC30.99■■■□□ 2.55
COL11A2P13942 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL11A2P13942 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL11A2P13942 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL11A2P13942 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
COL11A2P13942 AC074183.2-201ENST00000623112 922 ntBASIC30.97■■■□□ 2.55
COL11A2P13942 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.97■■■□□ 2.55
COL11A2P13942 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
COL11A2P13942 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL11A2P13942 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
COL11A2P13942 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.96■■■□□ 2.55
COL11A2P13942 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.96■■■□□ 2.55
COL11A2P13942 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL11A2P13942 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL11A2P13942 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.95■■■□□ 2.55
COL11A2P13942 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL11A2P13942 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.94■■■□□ 2.54
COL11A2P13942 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL11A2P13942 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
COL11A2P13942 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.93■■■□□ 2.54
COL11A2P13942 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
COL11A2P13942 THA1P-201ENST00000590384 1145 ntBASIC30.93■■■□□ 2.54
COL11A2P13942 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.93■■■□□ 2.54
COL11A2P13942 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.92■■■□□ 2.54
COL11A2P13942 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.92■■■□□ 2.54
COL11A2P13942 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
COL11A2P13942 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.92■■■□□ 2.54
COL11A2P13942 YBX1P4-201ENST00000392794 808 ntBASIC30.91■■■□□ 2.54
COL11A2P13942 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
COL11A2P13942 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL11A2P13942 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL11A2P13942 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL11A2P13942 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.9■■■□□ 2.54
COL11A2P13942 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.89■■■□□ 2.54
COL11A2P13942 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
COL11A2P13942 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
COL11A2P13942 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.89■■■□□ 2.54
COL11A2P13942 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.88■■■□□ 2.53
COL11A2P13942 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL11A2P13942 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.87■■■□□ 2.53
COL11A2P13942 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL11A2P13942 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL11A2P13942 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL11A2P13942 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
COL11A2P13942 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL11A2P13942 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.86■■■□□ 2.53
COL11A2P13942 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL11A2P13942 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL11A2P13942 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.84■■■□□ 2.53
COL11A2P13942 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL11A2P13942 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.84■■■□□ 2.53
COL11A2P13942 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
COL11A2P13942 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
COL11A2P13942 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.83■■■□□ 2.53
COL11A2P13942 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.83■■■□□ 2.53
COL11A2P13942 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.82■■■□□ 2.52
COL11A2P13942 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL11A2P13942 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.82■■■□□ 2.52
COL11A2P13942 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL11A2P13942 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms