Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 IFT172-217ENST00000509128 1723 ntTSL 1 (best)15.8■□□□□ 0.126e-6■■■■■ 27.6
XRCC6P12956 HSPA9-212ENST00000523929 780 ntTSL 415.78■□□□□ 0.126e-11■■■■■ 27.6
XRCC6P12956 MARCH6-203ENST00000502795 580 ntTSL 415.6■□□□□ 0.096e-6■■■■■ 27.6
XRCC6P12956 ELAC2-210ENST00000491478 758 ntTSL 515.45■□□□□ 0.066e-6■■■■■ 27.6
XRCC6P12956 TCF3-209ENST00000586410 288 ntTSL 515.02■□□□□ -06e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)14.74□□□□□ -0.056e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.116e-6■■■■■ 27.6
XRCC6P12956 DHPS-209ENST00000595844 909 ntTSL 214.21□□□□□ -0.136e-6■■■■■ 27.6
XRCC6P12956 AL390719.1-206ENST00000451054 565 ntTSL 213.88□□□□□ -0.196e-6■■■■■ 27.6
XRCC6P12956 IFT172-209ENST00000475909 402 ntTSL 513.84□□□□□ -0.196e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-211ENST00000479584 611 ntTSL 313.73□□□□□ -0.216e-6■■■■■ 27.6
XRCC6P12956 MARCH6-209ENST00000510872 577 ntTSL 413.53□□□□□ -0.246e-6■■■■■ 27.6
XRCC6P12956 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC13.29□□□□□ -0.286e-6■■■■■ 27.6
XRCC6P12956 IFT172-216ENST00000507184 5565 ntTSL 512.78□□□□□ -0.366e-6■■■■■ 27.6
XRCC6P12956 AL390719.1-203ENST00000456409 750 ntTSL 212.73□□□□□ -0.376e-6■■■■■ 27.6
XRCC6P12956 AL390719.1-205ENST00000433695 540 ntTSL 212.64□□□□□ -0.396e-6■■■■■ 27.6
XRCC6P12956 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.426e-11■■■■■ 27.6
XRCC6P12956 PBX2-203ENST00000480254 580 ntTSL 212.25□□□□□ -0.456e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-205ENST00000425647 2747 ntTSL 212.2□□□□□ -0.466e-6■■■■■ 27.6
XRCC6P12956 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC12.14□□□□□ -0.476e-6■■■■■ 27.6
XRCC6P12956 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.496e-6■■■■■ 27.6
XRCC6P12956 IFT172-201ENST00000260570 5415 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.526e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.616e-6■■■■■ 27.6
XRCC6P12956 HERC1-212ENST00000561348 588 ntTSL 211.23□□□□□ -0.616e-6■■■■■ 27.6
XRCC6P12956 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC11.18□□□□□ -0.626e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-216ENST00000483412 6235 ntTSL 1 (best)11.09□□□□□ -0.636e-6■■■■■ 27.6
XRCC6P12956 AL390719.1-202ENST00000394517 397 ntTSL 510.69□□□□□ -0.76e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-204ENST00000416449 3902 ntTSL 59.97□□□□□ -0.816e-6■■■■■ 27.6
XRCC6P12956 PRKCA-201ENST00000284384 2718 ntTSL 59.82□□□□□ -0.843e-6■■■■■ 27.6
XRCC6P12956 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)9.2□□□□□ -0.946e-6■■■■■ 27.6
XRCC6P12956 MARCH6-207ENST00000507863 582 ntTSL 48.78□□□□□ -16e-6■■■■■ 27.6
XRCC6P12956 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.013e-6■■■■■ 27.6
XRCC6P12956 MARCH6-210ENST00000511802 4734 ntTSL 28.53□□□□□ -1.046e-6■■■■■ 27.6
XRCC6P12956 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.176e-6■■■■■ 27.6
XRCC6P12956 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.9□□□□□ -1.796e-6■■■■■ 27.6
XRCC6P12956 HSPA9-202ENST00000501917 275 ntTSL 33.15□□□□□ -1.916e-11■■■■■ 27.6
XRCC6P12956 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.84■□□□□ 0.135e-12■■■■■ 27.6
XRCC6P12956 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.35e-12■■■■■ 27.6
XRCC6P12956 RPS16-206ENST00000601390 2389 ntTSL 213.14□□□□□ -0.315e-12■■■■■ 27.6
XRCC6P12956 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC11.18□□□□□ -0.625e-12■■■■■ 27.6
XRCC6P12956 RPS16-204ENST00000599539 555 ntTSL 2 BASIC10.82□□□□□ -0.685e-12■■■■■ 27.6
XRCC6P12956 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.072e-6■■■■■ 27.5
XRCC6P12956 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)10.05□□□□□ -0.82e-6■■■■■ 27.5
XRCC6P12956 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.171e-6■■■■■ 27.1
XRCC6P12956 SNF8-213ENST00000514929 775 ntTSL 527.27■■□□□ 1.961e-6■■■■■ 27.1
XRCC6P12956 SNF8-217ENST00000576353 700 ntTSL 526.25■■□□□ 1.791e-6■■■■■ 27.1
XRCC6P12956 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.722e-8■■■■■ 27.1
XRCC6P12956 SNF8-209ENST00000510558 1051 ntTSL 525.57■■□□□ 1.681e-6■■■■■ 27.1
XRCC6P12956 SNF8-216ENST00000573795 583 ntTSL 524.37■■□□□ 1.491e-6■■■■■ 27.1
XRCC6P12956 MVD-210ENST00000565610 507 ntTSL 322.06■■□□□ 1.123e-8■■■■■ 27.1
XRCC6P12956 MVD-208ENST00000563785 888 ntTSL 221.15■□□□□ 0.983e-8■■■■■ 27.1
XRCC6P12956 MVD-214ENST00000567064 758 ntTSL 320.93■□□□□ 0.943e-8■■■■■ 27.1
XRCC6P12956 MVD-216ENST00000568709 809 ntTSL 520.77■□□□□ 0.923e-8■■■■■ 27.1
XRCC6P12956 MVD-217ENST00000569177 870 ntTSL 519.01■□□□□ 0.633e-8■■■■■ 27.1
XRCC6P12956 MVD-206ENST00000563170 904 ntTSL 318.38■□□□□ 0.533e-8■■■■■ 27.1
XRCC6P12956 MVD-215ENST00000568133 853 ntTSL 318.36■□□□□ 0.533e-8■■■■■ 27.1
XRCC6P12956 SNF8-205ENST00000507302 742 ntTSL 318.21■□□□□ 0.511e-6■■■■■ 27.1
XRCC6P12956 MVD-207ENST00000563463 543 ntTSL 317.48■□□□□ 0.393e-8■■■■■ 27.1
XRCC6P12956 SNF8-212ENST00000514089 571 ntTSL 516.22■□□□□ 0.191e-6■■■■■ 27.1
XRCC6P12956 SNF8-206ENST00000509989 677 ntTSL 315.09■□□□□ 0.011e-6■■■■■ 27.1
XRCC6P12956 SNF8-215ENST00000515572 687 ntTSL 213.32□□□□□ -0.281e-6■■■■■ 27.1
XRCC6P12956 RAD51B-205ENST00000471583 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.381e-6■■■■■ 27.1
XRCC6P12956 SNF8-207ENST00000509995 560 ntTSL 311.66□□□□□ -0.541e-6■■■■■ 27.1
XRCC6P12956 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.541e-6■■■■■ 27.1
XRCC6P12956 RAD51B-208ENST00000479335 1615 ntTSL 1 (best)11.45□□□□□ -0.581e-6■■■■■ 27.1
XRCC6P12956 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC9.28□□□□□ -0.921e-6■■■■■ 27.1
XRCC6P12956 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.96□□□□□ -0.971e-6■■■■■ 27.1
XRCC6P12956 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.25□□□□□ -1.091e-6■■■■■ 27.1
XRCC6P12956 RAD51B-204ENST00000469165 1158 ntTSL 37.89□□□□□ -1.151e-6■■■■■ 27.1
XRCC6P12956 RAD51B-202ENST00000460526 794 ntTSL 37.89□□□□□ -1.151e-6■■■■■ 27.1
XRCC6P12956 RAD51B-207ENST00000478014 618 ntTSL 37.33□□□□□ -1.241e-6■■■■■ 27.1
XRCC6P12956 RAD51B-219ENST00000554244 669 ntTSL 37.11□□□□□ -1.271e-6■■■■■ 27.1
XRCC6P12956 RAD51B-213ENST00000492236 417 ntTSL 35.26□□□□□ -1.571e-6■■■■■ 27.1
XRCC6P12956 RAD51B-214ENST00000497460 546 ntTSL 45.12□□□□□ -1.591e-6■■■■■ 27.1
XRCC6P12956 RAD51B-216ENST00000553595 795 ntTSL 34.3□□□□□ -1.721e-6■■■■■ 27.1
XRCC6P12956 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.288e-7■■■■■ 27
XRCC6P12956 AIG1-204ENST00000367601 727 ntTSL 513.47□□□□□ -0.258e-7■■■■■ 27
XRCC6P12956 AIG1-205ENST00000447498 444 ntTSL 513.42□□□□□ -0.268e-7■■■■■ 27
XRCC6P12956 FAF1-205ENST00000494400 2127 ntTSL 212.76□□□□□ -0.378e-7■■■■■ 27
XRCC6P12956 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC10.9□□□□□ -0.668e-7■■■■■ 27
XRCC6P12956 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.78e-7■■■■■ 27
XRCC6P12956 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC9.66□□□□□ -0.868e-7■■■■■ 27
XRCC6P12956 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.97□□□□□ -1.138e-7■■■■■ 27
XRCC6P12956 AIG1-206ENST00000458219 593 ntTSL 27.64□□□□□ -1.198e-7■■■■■ 27
XRCC6P12956 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.35□□□□□ -1.398e-7■■■■■ 27
XRCC6P12956 AIG1-207ENST00000470265 572 ntTSL 24.99□□□□□ -1.618e-7■■■■■ 27
XRCC6P12956 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.15■■□□□ 1.143e-7■■■■■ 27
XRCC6P12956 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.993e-7■■■■■ 27
XRCC6P12956 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)15.97■□□□□ 0.153e-7■■■■■ 27
XRCC6P12956 FBXW2-201ENST00000453291 1079 ntTSL 522.67■■□□□ 1.221e-6■■■■□ 26.7
XRCC6P12956 FBXW2-204ENST00000493559 2154 ntTSL 213.37□□□□□ -0.271e-6■■■■□ 26.7
XRCC6P12956 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.111e-6■■■■□ 26.7
XRCC6P12956 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.629e-9■■■■□ 26.6
XRCC6P12956 INTS11-223ENST00000498173 1589 ntTSL 224.33■■□□□ 1.489e-9■■■■□ 26.6
XRCC6P12956 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.39■■□□□ 1.339e-9■■■■□ 26.6
XRCC6P12956 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.03■■□□□ 1.289e-9■■■■□ 26.6
XRCC6P12956 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.85■■□□□ 1.259e-9■■■■□ 26.6
XRCC6P12956 INTS11-221ENST00000496353 2428 ntTSL 222.38■■□□□ 1.179e-9■■■■□ 26.6
XRCC6P12956 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.9■■□□□ 1.19e-9■■■■□ 26.6
XRCC6P12956 INTS11-220ENST00000493534 896 ntTSL 321.74■■□□□ 1.079e-9■■■■□ 26.6
Retrieved 100 of 6,788 protein–RNA pairs in 86.4 ms