RNA–Protein interactions for RNA: ENST00000371778.5

FAF1-201, Transcript of Fas associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene FAF1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAF1-201ENST00000371778 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
FAF1-201ENST00000371778 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
FAF1-201ENST00000371778 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
FAF1-201ENST00000371778 ABCC9O60706 1549 aa20.49■□□□□ 0.87
FAF1-201ENST00000371778 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
FAF1-201ENST00000371778 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
FAF1-201ENST00000371778 NACADO15069 1562 aa19.77■□□□□ 0.75
FAF1-201ENST00000371778 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
FAF1-201ENST00000371778 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
FAF1-201ENST00000371778 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
FAF1-201ENST00000371778 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
FAF1-201ENST00000371778 UNC13AQ9UPW8 1703 aa19.32■□□□□ 0.68
FAF1-201ENST00000371778 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
FAF1-201ENST00000371778 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
FAF1-201ENST00000371778 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
FAF1-201ENST00000371778 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
FAF1-201ENST00000371778 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
FAF1-201ENST00000371778 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
FAF1-201ENST00000371778 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
FAF1-201ENST00000371778 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
FAF1-201ENST00000371778 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
FAF1-201ENST00000371778 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
FAF1-201ENST00000371778 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
FAF1-201ENST00000371778 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
FAF1-201ENST00000371778 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
FAF1-201ENST00000371778 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
FAF1-201ENST00000371778 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
FAF1-201ENST00000371778 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
FAF1-201ENST00000371778 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
FAF1-201ENST00000371778 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
FAF1-201ENST00000371778 WIZO95785 1651 aa18.01■□□□□ 0.47
FAF1-201ENST00000371778 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
FAF1-201ENST00000371778 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
FAF1-201ENST00000371778 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
FAF1-201ENST00000371778 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.43
FAF1-201ENST00000371778 NESP48681 1621 aa17.72■□□□□ 0.43
FAF1-201ENST00000371778 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
FAF1-201ENST00000371778 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
FAF1-201ENST00000371778 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
FAF1-201ENST00000371778 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
FAF1-201ENST00000371778 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
FAF1-201ENST00000371778 CFTRP13569 1480 aa17.57■□□□□ 0.4
FAF1-201ENST00000371778 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
FAF1-201ENST00000371778 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
FAF1-201ENST00000371778 CUX2O14529 1486 aa17.53■□□□□ 0.4
FAF1-201ENST00000371778 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
FAF1-201ENST00000371778 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
FAF1-201ENST00000371778 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
FAF1-201ENST00000371778 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
FAF1-201ENST00000371778 WDR62O43379 1518 aa17.38■□□□□ 0.37
FAF1-201ENST00000371778 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
FAF1-201ENST00000371778 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
FAF1-201ENST00000371778 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
FAF1-201ENST00000371778 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
FAF1-201ENST00000371778 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
FAF1-201ENST00000371778 CUX1P39880 1505 aa17.06■□□□□ 0.32
FAF1-201ENST00000371778 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
FAF1-201ENST00000371778 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
FAF1-201ENST00000371778 TARBP1Q13395 1621 aaKnown RBP17.01■□□□□ 0.31
FAF1-201ENST00000371778 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
FAF1-201ENST00000371778 SOGA1O94964 1423 aa16.97■□□□□ 0.31
FAF1-201ENST00000371778 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
FAF1-201ENST00000371778 EIF4G3O43432 1585 aaKnown RBP16.97■□□□□ 0.31
FAF1-201ENST00000371778 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
FAF1-201ENST00000371778 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
FAF1-201ENST00000371778 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
FAF1-201ENST00000371778 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
FAF1-201ENST00000371778 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
FAF1-201ENST00000371778 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■■□ 20.9
FAF1-201ENST00000371778 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
FAF1-201ENST00000371778 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
FAF1-201ENST00000371778 TDRD9Q8NDG6 1382 aaKnown RBP16.85■□□□□ 0.29
FAF1-201ENST00000371778 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
FAF1-201ENST00000371778 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
FAF1-201ENST00000371778 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
FAF1-201ENST00000371778 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
FAF1-201ENST00000371778 FOXD1Q16676 465 aa16.78■□□□□ 0.28
FAF1-201ENST00000371778 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.28
FAF1-201ENST00000371778 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
FAF1-201ENST00000371778 CHD1O14646 1710 aa16.75■□□□□ 0.27
FAF1-201ENST00000371778 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
FAF1-201ENST00000371778 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
FAF1-201ENST00000371778 FBLN2P98095 1184 aa16.69■□□□□ 0.26
FAF1-201ENST00000371778 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
FAF1-201ENST00000371778 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
FAF1-201ENST00000371778 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
FAF1-201ENST00000371778 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
FAF1-201ENST00000371778 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
FAF1-201ENST00000371778 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
FAF1-201ENST00000371778 GRIN2AQ12879 1464 aa16.58■□□□□ 0.25
FAF1-201ENST00000371778 CUL7Q14999 1698 aa16.57■□□□□ 0.24
FAF1-201ENST00000371778 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
FAF1-201ENST00000371778 IGF1RP08069 1367 aa16.51■□□□□ 0.23
FAF1-201ENST00000371778 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
FAF1-201ENST00000371778 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
FAF1-201ENST00000371778 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
FAF1-201ENST00000371778 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
FAF1-201ENST00000371778 NUP160Q12769 1436 aa16.5■□□□□ 0.23
FAF1-201ENST00000371778 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
FAF1-201ENST00000371778 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms