RNA–Protein interactions for RNA: ENST00000260570.7

IFT172-201, Transcript of intraflagellar transport 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT172, Length 5,415 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-201ENST00000260570 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
IFT172-201ENST00000260570 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
IFT172-201ENST00000260570 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
IFT172-201ENST00000260570 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
IFT172-201ENST00000260570 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
IFT172-201ENST00000260570 ABCC9O60706 1549 aa17.16■□□□□ 0.34
IFT172-201ENST00000260570 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
IFT172-201ENST00000260570 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
IFT172-201ENST00000260570 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■□□ 18.5
IFT172-201ENST00000260570 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
IFT172-201ENST00000260570 APLP2Q06481 763 aa16.81■□□□□ 0.28
IFT172-201ENST00000260570 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
IFT172-201ENST00000260570 ATP1B4Q9UN42 357 aaPredicted RBP16.62■□□□□ 0.25
IFT172-201ENST00000260570 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
IFT172-201ENST00000260570 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
IFT172-201ENST00000260570 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
IFT172-201ENST00000260570 CCDC180Q9P1Z9 1646 aa16.32■□□□□ 0.2
IFT172-201ENST00000260570 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
IFT172-201ENST00000260570 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
IFT172-201ENST00000260570 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
IFT172-201ENST00000260570 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
IFT172-201ENST00000260570 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
IFT172-201ENST00000260570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
IFT172-201ENST00000260570 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
IFT172-201ENST00000260570 CCER1Q8TC90 406 aaPredicted RBP16.06■□□□□ 0.16
IFT172-201ENST00000260570 ITGAEP38570 1179 aa16■□□□□ 0.15
IFT172-201ENST00000260570 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
IFT172-201ENST00000260570 FBLN2P98095 1184 aa15.98■□□□□ 0.15
IFT172-201ENST00000260570 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
IFT172-201ENST00000260570 NACADO15069 1562 aa15.83■□□□□ 0.12
IFT172-201ENST00000260570 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
IFT172-201ENST00000260570 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
IFT172-201ENST00000260570 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
IFT172-201ENST00000260570 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
IFT172-201ENST00000260570 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
IFT172-201ENST00000260570 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
IFT172-201ENST00000260570 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
IFT172-201ENST00000260570 ERICH6Q7L0X2 663 aa15.58■□□□□ 0.08
IFT172-201ENST00000260570 POLR3GLQ9BT43 218 aa15.53■□□□□ 0.08
IFT172-201ENST00000260570 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
IFT172-201ENST00000260570 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
IFT172-201ENST00000260570 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
IFT172-201ENST00000260570 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
IFT172-201ENST00000260570 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
IFT172-201ENST00000260570 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
IFT172-201ENST00000260570 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
IFT172-201ENST00000260570 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
IFT172-201ENST00000260570 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
IFT172-201ENST00000260570 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
IFT172-201ENST00000260570 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
IFT172-201ENST00000260570 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
IFT172-201ENST00000260570 HRCP23327 699 aa15.3■□□□□ 0.04
IFT172-201ENST00000260570 CDK11AQ9UQ88 783 aaPredicted RBP15.29■□□□□ 0.04
IFT172-201ENST00000260570 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
IFT172-201ENST00000260570 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
IFT172-201ENST00000260570 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.04
IFT172-201ENST00000260570 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.03
IFT172-201ENST00000260570 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
IFT172-201ENST00000260570 NEFLP07196 543 aa15.22■□□□□ 0.03
IFT172-201ENST00000260570 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
IFT172-201ENST00000260570 MYT1Q01538 1121 aa15.15■□□□□ 0.02
IFT172-201ENST00000260570 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
IFT172-201ENST00000260570 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
IFT172-201ENST00000260570 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
IFT172-201ENST00000260570 SMARCA2P51531 1590 aa15.11■□□□□ 0.01
IFT172-201ENST00000260570 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
IFT172-201ENST00000260570 CLIP1P30622 1438 aa15.1■□□□□ 0.01
IFT172-201ENST00000260570 BCANQ96GW7 911 aa15.1■□□□□ 0.01
IFT172-201ENST00000260570 KCNH8Q96L42 1107 aa15.09■□□□□ 0.01
IFT172-201ENST00000260570 WIZO95785 1651 aa15.07■□□□□ 0
IFT172-201ENST00000260570 MTUS2Q5JR59 1369 aa15.06■□□□□ 0
IFT172-201ENST00000260570 ESF1Q9H501 851 aaKnown RBP15.05■□□□□ 0
IFT172-201ENST00000260570 GOLGA3Q08378 1498 aa15.03■□□□□ -0
IFT172-201ENST00000260570 EEA1Q15075 1411 aa15.02■□□□□ -0
IFT172-201ENST00000260570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02□□□□□ -0.011e-6■■■□□ 14.9
IFT172-201ENST00000260570 CUX2O14529 1486 aa15.01□□□□□ -0.01
IFT172-201ENST00000260570 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
IFT172-201ENST00000260570 ABCC8Q09428 1581 aa15□□□□□ -0.01
IFT172-201ENST00000260570 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
IFT172-201ENST00000260570 ATAD2BQ9ULI0 1458 aa14.99□□□□□ -0.01
IFT172-201ENST00000260570 SOGA1O94964 1423 aa14.98□□□□□ -0.01
IFT172-201ENST00000260570 CEP162Q5TB80 1403 aa14.98□□□□□ -0.01
IFT172-201ENST00000260570 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
IFT172-201ENST00000260570 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
IFT172-201ENST00000260570 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
IFT172-201ENST00000260570 TSPY10P0CW01 314 aa14.95□□□□□ -0.02
IFT172-201ENST00000260570 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
IFT172-201ENST00000260570 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
IFT172-201ENST00000260570 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
IFT172-201ENST00000260570 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
IFT172-201ENST00000260570 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
IFT172-201ENST00000260570 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
IFT172-201ENST00000260570 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
IFT172-201ENST00000260570 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
IFT172-201ENST00000260570 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
IFT172-201ENST00000260570 RRP7BPQ9NSQ0 103 aa14.89□□□□□ -0.03
IFT172-201ENST00000260570 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
IFT172-201ENST00000260570 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
IFT172-201ENST00000260570 CFDP1Q9UEE9 299 aaPredicted RBP14.82□□□□□ -0.04
IFT172-201ENST00000260570 TONSLQ96HA7 1378 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms