RNA–Protein interactions for RNA: ENST00000586410.2

TCF3-209, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-209ENST00000586410 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
TCF3-209ENST00000586410 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
TCF3-209ENST00000586410 ABCC9O60706 1549 aa28.75■■■□□ 2.19
TCF3-209ENST00000586410 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
TCF3-209ENST00000586410 NACADO15069 1562 aa27.63■■■□□ 2.01
TCF3-209ENST00000586410 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
TCF3-209ENST00000586410 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
TCF3-209ENST00000586410 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
TCF3-209ENST00000586410 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
TCF3-209ENST00000586410 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
TCF3-209ENST00000586410 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
TCF3-209ENST00000586410 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
TCF3-209ENST00000586410 PABPN1Q86U42 306 aaKnown RBP eCLIP26.82■■□□□ 1.882e-6■□□□□ 9.6
TCF3-209ENST00000586410 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
TCF3-209ENST00000586410 DNAJC5BQ9UF47 199 aa26.42■■□□□ 1.82
TCF3-209ENST00000586410 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
TCF3-209ENST00000586410 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
TCF3-209ENST00000586410 CECR2Q9BXF3 1484 aa25.83■■□□□ 1.73
TCF3-209ENST00000586410 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
TCF3-209ENST00000586410 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
TCF3-209ENST00000586410 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
TCF3-209ENST00000586410 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
TCF3-209ENST00000586410 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
TCF3-209ENST00000586410 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
TCF3-209ENST00000586410 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
TCF3-209ENST00000586410 HMGXB3Q12766 1538 aa25.39■■□□□ 1.66
TCF3-209ENST00000586410 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
TCF3-209ENST00000586410 WIZO95785 1651 aa25.22■■□□□ 1.63
TCF3-209ENST00000586410 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
TCF3-209ENST00000586410 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
TCF3-209ENST00000586410 NESP48681 1621 aa24.91■■□□□ 1.58
TCF3-209ENST00000586410 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
TCF3-209ENST00000586410 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
TCF3-209ENST00000586410 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
TCF3-209ENST00000586410 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
TCF3-209ENST00000586410 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
TCF3-209ENST00000586410 CFTRP13569 1480 aa24.6■■□□□ 1.53
TCF3-209ENST00000586410 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
TCF3-209ENST00000586410 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
TCF3-209ENST00000586410 CUX2O14529 1486 aa24.53■■□□□ 1.52
TCF3-209ENST00000586410 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
TCF3-209ENST00000586410 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.51
TCF3-209ENST00000586410 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
TCF3-209ENST00000586410 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
TCF3-209ENST00000586410 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.49
TCF3-209ENST00000586410 WDR62O43379 1518 aa24.36■■□□□ 1.49
TCF3-209ENST00000586410 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
TCF3-209ENST00000586410 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
TCF3-209ENST00000586410 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
TCF3-209ENST00000586410 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
TCF3-209ENST00000586410 CUX1P39880 1505 aa23.92■■□□□ 1.42
TCF3-209ENST00000586410 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
TCF3-209ENST00000586410 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
TCF3-209ENST00000586410 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
TCF3-209ENST00000586410 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
TCF3-209ENST00000586410 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
TCF3-209ENST00000586410 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
TCF3-209ENST00000586410 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
TCF3-209ENST00000586410 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
TCF3-209ENST00000586410 SOGA1O94964 1423 aa23.72■■□□□ 1.39
TCF3-209ENST00000586410 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
TCF3-209ENST00000586410 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
TCF3-209ENST00000586410 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
TCF3-209ENST00000586410 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
TCF3-209ENST00000586410 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
TCF3-209ENST00000586410 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.381e-6■■■■□ 24.7
TCF3-209ENST00000586410 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
TCF3-209ENST00000586410 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.36
TCF3-209ENST00000586410 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
TCF3-209ENST00000586410 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
TCF3-209ENST00000586410 CHD1O14646 1710 aa23.47■■□□□ 1.35
TCF3-209ENST00000586410 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
TCF3-209ENST00000586410 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
TCF3-209ENST00000586410 SNAPC4Q5SXM2 1469 aa23.47■■□□□ 1.35
TCF3-209ENST00000586410 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
TCF3-209ENST00000586410 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
TCF3-209ENST00000586410 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
TCF3-209ENST00000586410 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
TCF3-209ENST00000586410 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
TCF3-209ENST00000586410 FBLN2P98095 1184 aa23.27■■□□□ 1.32
TCF3-209ENST00000586410 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
TCF3-209ENST00000586410 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
TCF3-209ENST00000586410 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
TCF3-209ENST00000586410 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
TCF3-209ENST00000586410 KIF27Q86VH2 1401 aa23.18■■□□□ 1.3
TCF3-209ENST00000586410 RIMBP3CA6NJZ7 1639 aa23.17■■□□□ 1.3
TCF3-209ENST00000586410 RIMBP3BA6NNM3 1639 aa23.17■■□□□ 1.3
TCF3-209ENST00000586410 RIMBP3Q9UFD9 1639 aa23.17■■□□□ 1.3
TCF3-209ENST00000586410 ARHGEF11O15085 1522 aa23.15■■□□□ 1.3
TCF3-209ENST00000586410 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
TCF3-209ENST00000586410 NUP160Q12769 1436 aa23.11■■□□□ 1.29
TCF3-209ENST00000586410 IGF1RP08069 1367 aa23.11■■□□□ 1.29
TCF3-209ENST00000586410 CUL7Q14999 1698 aa23.09■■□□□ 1.29
TCF3-209ENST00000586410 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
TCF3-209ENST00000586410 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
TCF3-209ENST00000586410 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
TCF3-209ENST00000586410 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
TCF3-209ENST00000586410 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
TCF3-209ENST00000586410 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
TCF3-209ENST00000586410 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms