RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-211ENST00000479584 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
CDK5RAP2-211ENST00000479584 CCDC180Q9P1Z9 1646 aa26.81■■□□□ 1.88
CDK5RAP2-211ENST00000479584 ABCC9O60706 1549 aa26.69■■□□□ 1.86
CDK5RAP2-211ENST00000479584 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
CDK5RAP2-211ENST00000479584 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
CDK5RAP2-211ENST00000479584 NACADO15069 1562 aa25.39■■□□□ 1.66
CDK5RAP2-211ENST00000479584 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
CDK5RAP2-211ENST00000479584 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
CDK5RAP2-211ENST00000479584 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
CDK5RAP2-211ENST00000479584 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
CDK5RAP2-211ENST00000479584 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
CDK5RAP2-211ENST00000479584 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
CDK5RAP2-211ENST00000479584 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
CDK5RAP2-211ENST00000479584 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
CDK5RAP2-211ENST00000479584 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.51
CDK5RAP2-211ENST00000479584 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
CDK5RAP2-211ENST00000479584 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
CDK5RAP2-211ENST00000479584 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
CDK5RAP2-211ENST00000479584 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
CDK5RAP2-211ENST00000479584 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
CDK5RAP2-211ENST00000479584 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
CDK5RAP2-211ENST00000479584 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
CDK5RAP2-211ENST00000479584 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
CDK5RAP2-211ENST00000479584 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
CDK5RAP2-211ENST00000479584 HMGXB3Q12766 1538 aa23.25■■□□□ 1.31
CDK5RAP2-211ENST00000479584 BAZ1BQ9UIG0 1483 aaKnown RBP23.22■■□□□ 1.31
CDK5RAP2-211ENST00000479584 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
CDK5RAP2-211ENST00000479584 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.3
CDK5RAP2-211ENST00000479584 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
CDK5RAP2-211ENST00000479584 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
CDK5RAP2-211ENST00000479584 NESP48681 1621 aa22.94■■□□□ 1.26
CDK5RAP2-211ENST00000479584 CUX2O14529 1486 aa22.91■■□□□ 1.26
CDK5RAP2-211ENST00000479584 WIZO95785 1651 aa22.86■■□□□ 1.25
CDK5RAP2-211ENST00000479584 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
CDK5RAP2-211ENST00000479584 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP2-211ENST00000479584 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
CDK5RAP2-211ENST00000479584 CADPSQ9ULU8 1353 aa22.81■■□□□ 1.24
CDK5RAP2-211ENST00000479584 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
CDK5RAP2-211ENST00000479584 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
CDK5RAP2-211ENST00000479584 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
CDK5RAP2-211ENST00000479584 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
CDK5RAP2-211ENST00000479584 CFTRP13569 1480 aa22.55■■□□□ 1.2
CDK5RAP2-211ENST00000479584 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
CDK5RAP2-211ENST00000479584 FANCD2Q9BXW9 1451 aa22.51■■□□□ 1.19
CDK5RAP2-211ENST00000479584 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
CDK5RAP2-211ENST00000479584 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
CDK5RAP2-211ENST00000479584 WDR62O43379 1518 aa22.41■■□□□ 1.18
CDK5RAP2-211ENST00000479584 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP2-211ENST00000479584 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
CDK5RAP2-211ENST00000479584 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
CDK5RAP2-211ENST00000479584 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
CDK5RAP2-211ENST00000479584 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
CDK5RAP2-211ENST00000479584 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
CDK5RAP2-211ENST00000479584 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
CDK5RAP2-211ENST00000479584 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
CDK5RAP2-211ENST00000479584 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
CDK5RAP2-211ENST00000479584 POLA1P09884 1462 aaPredicted RBP21.86■■□□□ 1.09
CDK5RAP2-211ENST00000479584 SOGA1O94964 1423 aa21.86■■□□□ 1.09
CDK5RAP2-211ENST00000479584 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
CDK5RAP2-211ENST00000479584 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.097e-7■□□□□ 9
CDK5RAP2-211ENST00000479584 RAD54L2Q9Y4B4 1467 aa21.79■■□□□ 1.08
CDK5RAP2-211ENST00000479584 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
CDK5RAP2-211ENST00000479584 FBLN2P98095 1184 aa21.78■■□□□ 1.08
CDK5RAP2-211ENST00000479584 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
CDK5RAP2-211ENST00000479584 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
CDK5RAP2-211ENST00000479584 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.07
CDK5RAP2-211ENST00000479584 CUX1P39880 1505 aa21.75■■□□□ 1.07
CDK5RAP2-211ENST00000479584 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP2-211ENST00000479584 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
CDK5RAP2-211ENST00000479584 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
CDK5RAP2-211ENST00000479584 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
CDK5RAP2-211ENST00000479584 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
CDK5RAP2-211ENST00000479584 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
CDK5RAP2-211ENST00000479584 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
CDK5RAP2-211ENST00000479584 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
CDK5RAP2-211ENST00000479584 CHD1O14646 1710 aa21.52■■□□□ 1.03
CDK5RAP2-211ENST00000479584 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
CDK5RAP2-211ENST00000479584 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
CDK5RAP2-211ENST00000479584 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
CDK5RAP2-211ENST00000479584 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
CDK5RAP2-211ENST00000479584 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
CDK5RAP2-211ENST00000479584 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
CDK5RAP2-211ENST00000479584 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
CDK5RAP2-211ENST00000479584 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
CDK5RAP2-211ENST00000479584 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
CDK5RAP2-211ENST00000479584 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
CDK5RAP2-211ENST00000479584 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
CDK5RAP2-211ENST00000479584 CLASP1Q7Z460 1538 aa21.33■■□□□ 1
CDK5RAP2-211ENST00000479584 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
CDK5RAP2-211ENST00000479584 ARAP1Q96P48 1450 aa21.31■■□□□ 1
CDK5RAP2-211ENST00000479584 GRIN2AQ12879 1464 aa21.29■■□□□ 1
CDK5RAP2-211ENST00000479584 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
CDK5RAP2-211ENST00000479584 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
CDK5RAP2-211ENST00000479584 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
CDK5RAP2-211ENST00000479584 NUP160Q12769 1436 aa21.21■□□□□ 0.99
CDK5RAP2-211ENST00000479584 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
CDK5RAP2-211ENST00000479584 IGF1RP08069 1367 aa21.14■□□□□ 0.98
CDK5RAP2-211ENST00000479584 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
CDK5RAP2-211ENST00000479584 JPH4Q96JJ6 628 aa21.12■□□□□ 0.97
CDK5RAP2-211ENST00000479584 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms