RNA–Protein interactions for RNA: ENST00000487270.5

RAD51B-210, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best) BASIC

Gene RAD51B, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-210ENST00000487270 NISCHQ9Y2I1 1504 aa13.52□□□□□ -0.24
RAD51B-210ENST00000487270 CCDC180Q9P1Z9 1646 aa11.9□□□□□ -0.5
RAD51B-210ENST00000487270 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
RAD51B-210ENST00000487270 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
RAD51B-210ENST00000487270 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.58
RAD51B-210ENST00000487270 ZCCHC6Q5VYS8 1495 aaKnown RBP11.42□□□□□ -0.58
RAD51B-210ENST00000487270 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
RAD51B-210ENST00000487270 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
RAD51B-210ENST00000487270 ABCC9O60706 1549 aa11.16□□□□□ -0.62
RAD51B-210ENST00000487270 MYO15BQ96JP2 1530 aa11.12□□□□□ -0.63
RAD51B-210ENST00000487270 NACADO15069 1562 aa11.05□□□□□ -0.64
RAD51B-210ENST00000487270 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
RAD51B-210ENST00000487270 PCGF6Q9BYE7 350 aa10.92□□□□□ -0.66
RAD51B-210ENST00000487270 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
RAD51B-210ENST00000487270 HRCP23327 699 aa10.87□□□□□ -0.67
RAD51B-210ENST00000487270 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
RAD51B-210ENST00000487270 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
RAD51B-210ENST00000487270 UNC13AQ9UPW8 1703 aa10.75□□□□□ -0.69
RAD51B-210ENST00000487270 PPARGC1BQ86YN6 1023 aaKnown RBP10.72□□□□□ -0.69
RAD51B-210ENST00000487270 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
RAD51B-210ENST00000487270 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
RAD51B-210ENST00000487270 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
RAD51B-210ENST00000487270 TRIM26Q12899 539 aaPredicted RBP10.65□□□□□ -0.71
RAD51B-210ENST00000487270 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
RAD51B-210ENST00000487270 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
RAD51B-210ENST00000487270 MROH2BQ7Z745 1585 aa10.54□□□□□ -0.72
RAD51B-210ENST00000487270 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
RAD51B-210ENST00000487270 WIZO95785 1651 aa10.47□□□□□ -0.73
RAD51B-210ENST00000487270 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
RAD51B-210ENST00000487270 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
RAD51B-210ENST00000487270 SMARCA4P51532 1647 aa10.41□□□□□ -0.74
RAD51B-210ENST00000487270 ZEB1P37275 1124 aaPredicted RBP10.4□□□□□ -0.74
RAD51B-210ENST00000487270 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
RAD51B-210ENST00000487270 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
RAD51B-210ENST00000487270 CCDC88BA6NC98 1476 aa10.3□□□□□ -0.76
RAD51B-210ENST00000487270 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
RAD51B-210ENST00000487270 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
RAD51B-210ENST00000487270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.76
RAD51B-210ENST00000487270 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
RAD51B-210ENST00000487270 SMARCA2P51531 1590 aa10.27□□□□□ -0.77
RAD51B-210ENST00000487270 CCER1Q8TC90 406 aaPredicted RBP10.24□□□□□ -0.77
RAD51B-210ENST00000487270 SOGA1O94964 1423 aa10.23□□□□□ -0.77
RAD51B-210ENST00000487270 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
RAD51B-210ENST00000487270 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.78
RAD51B-210ENST00000487270 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
RAD51B-210ENST00000487270 HMGXB3Q12766 1538 aa10.19□□□□□ -0.78
RAD51B-210ENST00000487270 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
RAD51B-210ENST00000487270 RUSC2Q8N2Y8 1516 aa10.18□□□□□ -0.78
RAD51B-210ENST00000487270 BAZ1BQ9UIG0 1483 aaKnown RBP10.17□□□□□ -0.78
RAD51B-210ENST00000487270 CC2D2AQ9P2K1 1620 aa10.15□□□□□ -0.78
RAD51B-210ENST00000487270 TNIKQ9UKE5 1360 aa10.15□□□□□ -0.79
RAD51B-210ENST00000487270 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
RAD51B-210ENST00000487270 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
RAD51B-210ENST00000487270 EEA1Q15075 1411 aa10.11□□□□□ -0.79
RAD51B-210ENST00000487270 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
RAD51B-210ENST00000487270 GOLGA3Q08378 1498 aa10.06□□□□□ -0.8
RAD51B-210ENST00000487270 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
RAD51B-210ENST00000487270 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
RAD51B-210ENST00000487270 DIEXFQ68CQ4 756 aaKnown RBP10.03□□□□□ -0.8
RAD51B-210ENST00000487270 SYNJ1O43426 1573 aa10.01□□□□□ -0.81
RAD51B-210ENST00000487270 CEP164Q9UPV0 1460 aa10□□□□□ -0.81
RAD51B-210ENST00000487270 APLP2Q06481 763 aa10□□□□□ -0.81
RAD51B-210ENST00000487270 CLIP1P30622 1438 aa9.99□□□□□ -0.81
RAD51B-210ENST00000487270 PRDM2Q13029 1718 aa9.98□□□□□ -0.81
RAD51B-210ENST00000487270 RAPGEF2Q9Y4G8 1499 aa9.96□□□□□ -0.82
RAD51B-210ENST00000487270 NEUROD1Q13562 356 aa9.96□□□□□ -0.82
RAD51B-210ENST00000487270 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
RAD51B-210ENST00000487270 ACIN1Q9UKV3 1341 aaKnown RBP9.94□□□□□ -0.82
RAD51B-210ENST00000487270 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
RAD51B-210ENST00000487270 VPS8Q8N3P4 1428 aa9.92□□□□□ -0.82
RAD51B-210ENST00000487270 KIF21BO75037 1637 aa9.92□□□□□ -0.82
RAD51B-210ENST00000487270 CFTRP13569 1480 aa9.9□□□□□ -0.82
RAD51B-210ENST00000487270 CENPBP07199 599 aaPredicted RBP9.89□□□□□ -0.83
RAD51B-210ENST00000487270 LAMC3Q9Y6N6 1575 aa9.87□□□□□ -0.83
RAD51B-210ENST00000487270 GTF3C3Q9Y5Q9 886 aa9.87□□□□□ -0.83
RAD51B-210ENST00000487270 TOP2BQ02880 1626 aa9.86□□□□□ -0.83
RAD51B-210ENST00000487270 YTHDC1Q96MU7 727 aaKnown RBP9.86□□□□□ -0.83
RAD51B-210ENST00000487270 CADPSQ9ULU8 1353 aa9.86□□□□□ -0.83
RAD51B-210ENST00000487270 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
RAD51B-210ENST00000487270 MIER1Q8N108 512 aa9.82□□□□□ -0.84
RAD51B-210ENST00000487270 PRXQ9BXM0 1461 aa9.82□□□□□ -0.84
RAD51B-210ENST00000487270 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
RAD51B-210ENST00000487270 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
RAD51B-210ENST00000487270 DNAJC5BQ9UF47 199 aa9.8□□□□□ -0.84
RAD51B-210ENST00000487270 CUX1P39880 1505 aa9.8□□□□□ -0.84
RAD51B-210ENST00000487270 BIVM-ERCC5R4GMW8 1640 aa9.79□□□□□ -0.84
RAD51B-210ENST00000487270 ITGAEP38570 1179 aa9.78□□□□□ -0.84
RAD51B-210ENST00000487270 ARAP1Q96P48 1450 aa9.78□□□□□ -0.84
RAD51B-210ENST00000487270 FANCD2Q9BXW9 1451 aa9.77□□□□□ -0.85
RAD51B-210ENST00000487270 ERICH3Q5RHP9 1530 aa9.77□□□□□ -0.85
RAD51B-210ENST00000487270 NESP48681 1621 aa9.76□□□□□ -0.85
RAD51B-210ENST00000487270 PDS5BQ9NTI5 1447 aa9.76□□□□□ -0.85
RAD51B-210ENST00000487270 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
RAD51B-210ENST00000487270 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
RAD51B-210ENST00000487270 DNMBPQ6XZF7 1577 aa9.72□□□□□ -0.85
RAD51B-210ENST00000487270 CUX2O14529 1486 aa9.72□□□□□ -0.85
RAD51B-210ENST00000487270 IGF1RP08069 1367 aa9.72□□□□□ -0.85
RAD51B-210ENST00000487270 ARHGAP35Q9NRY4 1499 aa9.71□□□□□ -0.86
RAD51B-210ENST00000487270 CLSPNQ9HAW4 1339 aa9.7□□□□□ -0.86
RAD51B-210ENST00000487270 P3H3Q8IVL6 736 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms