RNA–Protein interactions for RNA: ENST00000509128.5

IFT172-217, Transcript of intraflagellar transport 172, humanhuman

TSL 1 (best)

Gene IFT172, Length 1,723 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-217ENST00000509128 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
IFT172-217ENST00000509128 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
IFT172-217ENST00000509128 ABCC9O60706 1549 aa29.16■■■□□ 2.26
IFT172-217ENST00000509128 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
IFT172-217ENST00000509128 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
IFT172-217ENST00000509128 NACADO15069 1562 aa28.09■■■□□ 2.09
IFT172-217ENST00000509128 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
IFT172-217ENST00000509128 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
IFT172-217ENST00000509128 MYO15BQ96JP2 1530 aa27.95■■■□□ 2.06
IFT172-217ENST00000509128 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
IFT172-217ENST00000509128 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
IFT172-217ENST00000509128 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
IFT172-217ENST00000509128 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.961e-6■■■□□ 18.5
IFT172-217ENST00000509128 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
IFT172-217ENST00000509128 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
IFT172-217ENST00000509128 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
IFT172-217ENST00000509128 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
IFT172-217ENST00000509128 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
IFT172-217ENST00000509128 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
IFT172-217ENST00000509128 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
IFT172-217ENST00000509128 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
IFT172-217ENST00000509128 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
IFT172-217ENST00000509128 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
IFT172-217ENST00000509128 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
IFT172-217ENST00000509128 WIZO95785 1651 aa25.94■■□□□ 1.74
IFT172-217ENST00000509128 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
IFT172-217ENST00000509128 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
IFT172-217ENST00000509128 HMGXB3Q12766 1538 aa25.84■■□□□ 1.73
IFT172-217ENST00000509128 BAZ1BQ9UIG0 1483 aaKnown RBP25.81■■□□□ 1.72
IFT172-217ENST00000509128 TOP2AP11388 1531 aaKnown RBP25.59■■□□□ 1.69
IFT172-217ENST00000509128 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
IFT172-217ENST00000509128 NESP48681 1621 aa25.34■■□□□ 1.65
IFT172-217ENST00000509128 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
IFT172-217ENST00000509128 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
IFT172-217ENST00000509128 CADPSQ9ULU8 1353 aa25.16■■□□□ 1.62
IFT172-217ENST00000509128 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
IFT172-217ENST00000509128 CFTRP13569 1480 aa25.09■■□□□ 1.61
IFT172-217ENST00000509128 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
IFT172-217ENST00000509128 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
IFT172-217ENST00000509128 PDS5BQ9NTI5 1447 aa24.98■■□□□ 1.59
IFT172-217ENST00000509128 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
IFT172-217ENST00000509128 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
IFT172-217ENST00000509128 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
IFT172-217ENST00000509128 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
IFT172-217ENST00000509128 WDR62O43379 1518 aa24.7■■□□□ 1.54
IFT172-217ENST00000509128 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
IFT172-217ENST00000509128 CUX2O14529 1486 aa24.64■■□□□ 1.54
IFT172-217ENST00000509128 TOPBP1Q92547 1522 aa24.58■■□□□ 1.52
IFT172-217ENST00000509128 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
IFT172-217ENST00000509128 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
IFT172-217ENST00000509128 CUX1P39880 1505 aa24.51■■□□□ 1.51
IFT172-217ENST00000509128 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
IFT172-217ENST00000509128 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
IFT172-217ENST00000509128 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
IFT172-217ENST00000509128 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
IFT172-217ENST00000509128 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
IFT172-217ENST00000509128 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
IFT172-217ENST00000509128 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
IFT172-217ENST00000509128 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
IFT172-217ENST00000509128 IFT140Q96RY7 1462 aa24.3■■□□□ 1.48
IFT172-217ENST00000509128 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
IFT172-217ENST00000509128 SOGA1O94964 1423 aa24.24■■□□□ 1.47
IFT172-217ENST00000509128 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
IFT172-217ENST00000509128 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
IFT172-217ENST00000509128 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.45
IFT172-217ENST00000509128 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
IFT172-217ENST00000509128 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
IFT172-217ENST00000509128 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
IFT172-217ENST00000509128 PBRM1Q86U86 1689 aa24.04■■□□□ 1.44
IFT172-217ENST00000509128 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
IFT172-217ENST00000509128 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
IFT172-217ENST00000509128 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
IFT172-217ENST00000509128 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
IFT172-217ENST00000509128 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
IFT172-217ENST00000509128 CHD1O14646 1710 aa23.9■■□□□ 1.42
IFT172-217ENST00000509128 KIF27Q86VH2 1401 aa23.83■■□□□ 1.41
IFT172-217ENST00000509128 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
IFT172-217ENST00000509128 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
IFT172-217ENST00000509128 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
IFT172-217ENST00000509128 ADAMTS12P58397 1594 aa23.81■■□□□ 1.4
IFT172-217ENST00000509128 FBLN2P98095 1184 aa23.76■■□□□ 1.39
IFT172-217ENST00000509128 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
IFT172-217ENST00000509128 IGF1RP08069 1367 aa23.71■■□□□ 1.39
IFT172-217ENST00000509128 CUL7Q14999 1698 aa23.7■■□□□ 1.38
IFT172-217ENST00000509128 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
IFT172-217ENST00000509128 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
IFT172-217ENST00000509128 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
IFT172-217ENST00000509128 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
IFT172-217ENST00000509128 CEP170Q5SW79 1584 aa23.59■■□□□ 1.37
IFT172-217ENST00000509128 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
IFT172-217ENST00000509128 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.36
IFT172-217ENST00000509128 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
IFT172-217ENST00000509128 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
IFT172-217ENST00000509128 NUP160Q12769 1436 aa23.51■■□□□ 1.35
IFT172-217ENST00000509128 EEA1Q15075 1411 aa23.5■■□□□ 1.35
IFT172-217ENST00000509128 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
IFT172-217ENST00000509128 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
IFT172-217ENST00000509128 PRXQ9BXM0 1461 aa23.46■■□□□ 1.35
IFT172-217ENST00000509128 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
IFT172-217ENST00000509128 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms