Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SRGAP3O43295 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SRGAP3O43295 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.93■■■□□ 2.54
SRGAP3O43295 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SRGAP3O43295 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.92■■■□□ 2.54
SRGAP3O43295 AL449106.1-201ENST00000608517 1980 ntBASIC30.92■■■□□ 2.54
SRGAP3O43295 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SRGAP3O43295 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SRGAP3O43295 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SRGAP3O43295 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.9■■■□□ 2.54
SRGAP3O43295 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SRGAP3O43295 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
SRGAP3O43295 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.89■■■□□ 2.54
SRGAP3O43295 AC092296.2-201ENST00000589470 999 ntBASIC30.89■■■□□ 2.54
SRGAP3O43295 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SRGAP3O43295 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SRGAP3O43295 AL157400.5-201ENST00000507624 621 ntBASIC30.88■■■□□ 2.53
SRGAP3O43295 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SRGAP3O43295 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SRGAP3O43295 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SRGAP3O43295 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
SRGAP3O43295 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.87■■■□□ 2.53
SRGAP3O43295 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SRGAP3O43295 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SRGAP3O43295 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.86■■■□□ 2.53
SRGAP3O43295 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SRGAP3O43295 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SRGAP3O43295 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SRGAP3O43295 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
SRGAP3O43295 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SRGAP3O43295 RNF126P1-201ENST00000567452 1320 ntBASIC30.84■■■□□ 2.53
SRGAP3O43295 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.84■■■□□ 2.53
SRGAP3O43295 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
SRGAP3O43295 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
SRGAP3O43295 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SRGAP3O43295 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SRGAP3O43295 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SRGAP3O43295 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
SRGAP3O43295 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.82■■■□□ 2.52
SRGAP3O43295 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
SRGAP3O43295 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
SRGAP3O43295 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SRGAP3O43295 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.8■■■□□ 2.52
SRGAP3O43295 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
SRGAP3O43295 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.78■■■□□ 2.52
SRGAP3O43295 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SRGAP3O43295 RARRES2P2-201ENST00000394842 485 ntBASIC30.78■■■□□ 2.52
SRGAP3O43295 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SRGAP3O43295 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.77■■■□□ 2.52
SRGAP3O43295 ECEL1P2-201ENST00000461596 1295 ntBASIC30.77■■■□□ 2.52
SRGAP3O43295 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.77■■■□□ 2.52
SRGAP3O43295 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SRGAP3O43295 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SRGAP3O43295 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SRGAP3O43295 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SRGAP3O43295 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SRGAP3O43295 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SRGAP3O43295 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SRGAP3O43295 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.75■■■□□ 2.51
SRGAP3O43295 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.75■■■□□ 2.51
SRGAP3O43295 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SRGAP3O43295 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
SRGAP3O43295 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SRGAP3O43295 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SRGAP3O43295 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.74■■■□□ 2.51
SRGAP3O43295 AL359504.2-201ENST00000605506 1601 ntBASIC30.74■■■□□ 2.51
SRGAP3O43295 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SRGAP3O43295 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
SRGAP3O43295 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.74■■■□□ 2.51
SRGAP3O43295 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SRGAP3O43295 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.73■■■□□ 2.51
SRGAP3O43295 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.73■■■□□ 2.51
SRGAP3O43295 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SRGAP3O43295 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.73■■■□□ 2.51
SRGAP3O43295 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SRGAP3O43295 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SRGAP3O43295 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.72■■■□□ 2.51
SRGAP3O43295 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SRGAP3O43295 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
SRGAP3O43295 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.71■■■□□ 2.51
SRGAP3O43295 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SRGAP3O43295 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
SRGAP3O43295 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
SRGAP3O43295 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.7■■■□□ 2.5
SRGAP3O43295 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SRGAP3O43295 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
SRGAP3O43295 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SRGAP3O43295 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
SRGAP3O43295 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SRGAP3O43295 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.67■■■□□ 2.5
SRGAP3O43295 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
SRGAP3O43295 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
SRGAP3O43295 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SRGAP3O43295 AC025884.2-201ENST00000553429 711 ntBASIC30.67■■■□□ 2.5
SRGAP3O43295 SMPD5-203ENST00000639008 1464 ntBASIC30.67■■■□□ 2.5
SRGAP3O43295 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.67■■■□□ 2.5
SRGAP3O43295 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SRGAP3O43295 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
SRGAP3O43295 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SRGAP3O43295 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms