Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 SDHAP1-207ENST00000440850 2000 ntBASIC15.82■□□□□ 0.12
C11orf88Q6PI97 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 SNORA78-201ENST00000459373 127 ntBASIC15.82■□□□□ 0.12
C11orf88Q6PI97 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 AL121906.2-201ENST00000621597 723 ntBASIC15.82■□□□□ 0.12
C11orf88Q6PI97 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 AC104417.2-201ENST00000562989 1793 ntBASIC15.82■□□□□ 0.12
C11orf88Q6PI97 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.82■□□□□ 0.12
C11orf88Q6PI97 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 AL049637.2-201ENST00000641778 930 ntBASIC15.81■□□□□ 0.12
C11orf88Q6PI97 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C11orf88Q6PI97 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 AC124283.5-201ENST00000624661 1809 ntBASIC15.8■□□□□ 0.12
C11orf88Q6PI97 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.8■□□□□ 0.12
C11orf88Q6PI97 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms