RNA–Protein interactions for RNA: ENST00000393862.6

TREX2-207, Transcript of three prime repair exonuclease 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TREX2, Length 907 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-207ENST00000393862 NISCHQ9Y2I1 1504 aa47.65■■■■■ 5.22
TREX2-207ENST00000393862 CCDC180Q9P1Z9 1646 aa42.45■■■■■ 4.39
TREX2-207ENST00000393862 ABCC9O60706 1549 aa40.92■■■■■ 4.14
TREX2-207ENST00000393862 ZCCHC6Q5VYS8 1495 aaKnown RBP39.75■■■■□ 3.95
TREX2-207ENST00000393862 NACADO15069 1562 aa39.74■■■■□ 3.95
TREX2-207ENST00000393862 RB1CC1Q8TDY2 1594 aa39.71■■■■□ 3.95
TREX2-207ENST00000393862 MYO15BQ96JP2 1530 aa39.66■■■■□ 3.94
TREX2-207ENST00000393862 DCAF1Q9Y4B6 1507 aa39.57■■■■□ 3.93
TREX2-207ENST00000393862 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
TREX2-207ENST00000393862 UNC13AQ9UPW8 1703 aa38.92■■■■□ 3.82
TREX2-207ENST00000393862 SCRIBQ14160 1630 aa38.51■■■■□ 3.76
TREX2-207ENST00000393862 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
TREX2-207ENST00000393862 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
TREX2-207ENST00000393862 PABPN1Q86U42 306 aaKnown RBP eCLIP38.17■■■■□ 3.7
TREX2-207ENST00000393862 EIF4G1Q04637 1599 aaKnown RBP37.4■■■■□ 3.58
TREX2-207ENST00000393862 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
TREX2-207ENST00000393862 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
TREX2-207ENST00000393862 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
TREX2-207ENST00000393862 BAZ1AQ9NRL2 1556 aaPredicted RBP36.96■■■■□ 3.51
TREX2-207ENST00000393862 CECR2Q9BXF3 1484 aa36.96■■■■□ 3.51
TREX2-207ENST00000393862 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
TREX2-207ENST00000393862 PEG3Q9GZU2 1588 aa36.66■■■■□ 3.46
TREX2-207ENST00000393862 MROH2BQ7Z745 1585 aa36.66■■■■□ 3.46
TREX2-207ENST00000393862 ATAD2BQ9ULI0 1458 aa36.6■■■■□ 3.45
TREX2-207ENST00000393862 NCAPD3P42695 1498 aa36.59■■■■□ 3.45
TREX2-207ENST00000393862 HMGXB3Q12766 1538 aa36.51■■■■□ 3.44
TREX2-207ENST00000393862 WIZO95785 1651 aa36.33■■■■□ 3.41
TREX2-207ENST00000393862 BAZ1BQ9UIG0 1483 aaKnown RBP36.33■■■■□ 3.41
TREX2-207ENST00000393862 RSF1Q96T23 1441 aaPredicted RBP36.33■■■■□ 3.41
TREX2-207ENST00000393862 TOP2AP11388 1531 aaKnown RBP35.99■■■■□ 3.35
TREX2-207ENST00000393862 LAMC3Q9Y6N6 1575 aa35.67■■■■□ 3.3
TREX2-207ENST00000393862 NESP48681 1621 aa35.5■■■■□ 3.27
TREX2-207ENST00000393862 CADPSQ9ULU8 1353 aa35.49■■■■□ 3.27
TREX2-207ENST00000393862 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
TREX2-207ENST00000393862 SUPT5HO00267 1087 aaKnown RBP35.43■■■■□ 3.26
TREX2-207ENST00000393862 PRDM2Q13029 1718 aa35.42■■■■□ 3.26
TREX2-207ENST00000393862 CFTRP13569 1480 aa35.37■■■■□ 3.25
TREX2-207ENST00000393862 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.25
TREX2-207ENST00000393862 ERCC6Q03468 1493 aa35.3■■■■□ 3.24
TREX2-207ENST00000393862 KIF21AQ7Z4S6 1674 aa35.28■■■■□ 3.24
TREX2-207ENST00000393862 FANCD2Q9BXW9 1451 aa35.08■■■■□ 3.21
TREX2-207ENST00000393862 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
TREX2-207ENST00000393862 CEP164Q9UPV0 1460 aa35.04■■■■□ 3.2
TREX2-207ENST00000393862 CUX2O14529 1486 aa34.95■■■■□ 3.19
TREX2-207ENST00000393862 MRC2Q9UBG0 1479 aa34.93■■■■□ 3.18
TREX2-207ENST00000393862 WDR62O43379 1518 aa34.86■■■■□ 3.17
TREX2-207ENST00000393862 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
TREX2-207ENST00000393862 ABCC8Q09428 1581 aa34.7■■■■□ 3.15
TREX2-207ENST00000393862 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
TREX2-207ENST00000393862 TOPBP1Q92547 1522 aa34.57■■■■□ 3.12
TREX2-207ENST00000393862 CUX1P39880 1505 aa34.4■■■■□ 3.1
TREX2-207ENST00000393862 BIVM-ERCC5R4GMW8 1640 aa34.31■■■■□ 3.08
TREX2-207ENST00000393862 IFT140Q96RY7 1462 aa34.31■■■■□ 3.08
TREX2-207ENST00000393862 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
TREX2-207ENST00000393862 TOP2BQ02880 1626 aa34.27■■■■□ 3.08
TREX2-207ENST00000393862 WRNQ14191 1432 aaPredicted RBP eCLIP34.27■■■■□ 3.08
TREX2-207ENST00000393862 TARBP1Q13395 1621 aaKnown RBP34.25■■■■□ 3.07
TREX2-207ENST00000393862 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
TREX2-207ENST00000393862 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
TREX2-207ENST00000393862 WDR97A6NE52 1622 aa34.13■■■■□ 3.05
TREX2-207ENST00000393862 SOGA1O94964 1423 aa34.11■■■■□ 3.05
TREX2-207ENST00000393862 EIF4G3O43432 1585 aaKnown RBP34.03■■■■□ 3.04
TREX2-207ENST00000393862 RAD54L2Q9Y4B4 1467 aa34.03■■■■□ 3.04
TREX2-207ENST00000393862 ZNF608Q9ULD9 1512 aaPredicted RBP34.02■■■■□ 3.04
TREX2-207ENST00000393862 ABCA10Q8WWZ4 1543 aa33.97■■■■□ 3.03
TREX2-207ENST00000393862 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
TREX2-207ENST00000393862 AQRO60306 1485 aaKnown RBP eCLIP33.85■■■■□ 3.01
TREX2-207ENST00000393862 PBRM1Q86U86 1689 aa33.82■■■■□ 3
TREX2-207ENST00000393862 TDRD9Q8NDG6 1382 aaKnown RBP33.81■■■■□ 3
TREX2-207ENST00000393862 GAPVD1Q14C86 1478 aa33.76■■■■□ 3
TREX2-207ENST00000393862 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
TREX2-207ENST00000393862 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
TREX2-207ENST00000393862 CHD1O14646 1710 aa33.62■■■□□ 2.97
TREX2-207ENST00000393862 ERICH3Q5RHP9 1530 aa33.62■■■□□ 2.97
TREX2-207ENST00000393862 SNAPC4Q5SXM2 1469 aa33.59■■■□□ 2.97
TREX2-207ENST00000393862 KIF27Q86VH2 1401 aa33.55■■■□□ 2.96
TREX2-207ENST00000393862 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
TREX2-207ENST00000393862 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
TREX2-207ENST00000393862 ADAMTS12P58397 1594 aa33.49■■■□□ 2.95
TREX2-207ENST00000393862 CUL7Q14999 1698 aa33.43■■■□□ 2.94
TREX2-207ENST00000393862 OSCARQ8IYS5 282 aa33.43■■■□□ 2.94
TREX2-207ENST00000393862 DNAJC5Q9H3Z4 198 aa33.41■■■□□ 2.94
TREX2-207ENST00000393862 FHAD1B1AJZ9 1412 aa33.39■■■□□ 2.94
TREX2-207ENST00000393862 CHMP7Q8WUX9 453 aaPredicted RBP33.35■■■□□ 2.93
TREX2-207ENST00000393862 IGF1RP08069 1367 aa33.32■■■□□ 2.92
TREX2-207ENST00000393862 FBLN2P98095 1184 aa33.31■■■□□ 2.92
TREX2-207ENST00000393862 CHIC1Q5VXU3 224 aa33.31■■■□□ 2.92
TREX2-207ENST00000393862 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
TREX2-207ENST00000393862 RUSC2Q8N2Y8 1516 aa33.21■■■□□ 2.91
TREX2-207ENST00000393862 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.91
TREX2-207ENST00000393862 EEA1Q15075 1411 aa33.18■■■□□ 2.9
TREX2-207ENST00000393862 NUP160Q12769 1436 aa33.15■■■□□ 2.9
TREX2-207ENST00000393862 CARMIL1Q5VZK9 1371 aa33.14■■■□□ 2.9
TREX2-207ENST00000393862 CEP170Q5SW79 1584 aa33.12■■■□□ 2.89
TREX2-207ENST00000393862 RAPGEF2Q9Y4G8 1499 aa33.03■■■□□ 2.88
TREX2-207ENST00000393862 SHROOM2Q13796 1616 aa32.98■■■□□ 2.87
TREX2-207ENST00000393862 PRXQ9BXM0 1461 aa32.98■■■□□ 2.87
TREX2-207ENST00000393862 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.86
TREX2-207ENST00000393862 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.86
TREX2-207ENST00000393862 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms