Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC24.26■■□□□ 1.47
ZC3H6P61129 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.26■■□□□ 1.47
ZC3H6P61129 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.26■■□□□ 1.47
ZC3H6P61129 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H6P61129 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
ZC3H6P61129 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC24.25■■□□□ 1.47
ZC3H6P61129 LBH-203ENST00000404397 543 ntTSL 4 BASIC24.25■■□□□ 1.47
ZC3H6P61129 COA5-202ENST00000409997 557 ntTSL 4 BASIC24.25■■□□□ 1.47
ZC3H6P61129 KRT18P65-201ENST00000439811 1286 ntBASIC24.25■■□□□ 1.47
ZC3H6P61129 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 BX005266.1-201ENST00000473402 457 ntBASIC24.25■■□□□ 1.47
ZC3H6P61129 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.25■■□□□ 1.47
ZC3H6P61129 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.25■■□□□ 1.47
ZC3H6P61129 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC24.25■■□□□ 1.47
ZC3H6P61129 AC002347.1-201ENST00000569543 541 ntBASIC24.25■■□□□ 1.47
ZC3H6P61129 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.25■■□□□ 1.47
ZC3H6P61129 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
ZC3H6P61129 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H6P61129 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.25■■□□□ 1.47
ZC3H6P61129 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.24■■□□□ 1.47
ZC3H6P61129 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H6P61129 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H6P61129 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC24.24■■□□□ 1.47
ZC3H6P61129 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H6P61129 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H6P61129 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.24■■□□□ 1.47
ZC3H6P61129 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.24■■□□□ 1.47
ZC3H6P61129 AC112698.1-201ENST00000510299 916 ntBASIC24.24■■□□□ 1.47
ZC3H6P61129 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.24■■□□□ 1.47
ZC3H6P61129 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
ZC3H6P61129 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC24.24■■□□□ 1.47
ZC3H6P61129 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H6P61129 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
ZC3H6P61129 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H6P61129 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3H6P61129 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 LAGE3P1-201ENST00000425356 484 ntBASIC24.23■■□□□ 1.47
ZC3H6P61129 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC24.23■■□□□ 1.47
ZC3H6P61129 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3H6P61129 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3H6P61129 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC24.23■■□□□ 1.47
ZC3H6P61129 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.23■■□□□ 1.47
ZC3H6P61129 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3H6P61129 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H6P61129 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 AC004817.3-201ENST00000602957 2129 ntBASIC24.22■■□□□ 1.47
ZC3H6P61129 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.22■■□□□ 1.47
ZC3H6P61129 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.22■■□□□ 1.47
ZC3H6P61129 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.22■■□□□ 1.47
ZC3H6P61129 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.22■■□□□ 1.47
ZC3H6P61129 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.22■■□□□ 1.47
ZC3H6P61129 AFG3L1P-217ENST00000557444 2447 ntBASIC24.22■■□□□ 1.47
ZC3H6P61129 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
ZC3H6P61129 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H6P61129 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H6P61129 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H6P61129 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H6P61129 BEX3-201ENST00000361298 921 ntTSL 2 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms