Protein–RNA interactions for Protein: Q309B1

TRIM16L, Tripartite motif-containing protein 16-like protein, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16LQ309B1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 AC110285.6-201ENST00000617652 491 ntBASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM16LQ309B1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 LINC02228-203ENST00000641970 1355 ntBASIC16.31■□□□□ 0.2
TRIM16LQ309B1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 AL031432.3-201ENST00000607698 485 ntBASIC16.31■□□□□ 0.2
TRIM16LQ309B1 AL356652.1-201ENST00000615962 565 ntBASIC16.31■□□□□ 0.2
TRIM16LQ309B1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM16LQ309B1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 SDHAP1-207ENST00000440850 2000 ntBASIC16.3■□□□□ 0.2
TRIM16LQ309B1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM16LQ309B1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms