RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 NISCHQ9Y2I1 1504 aa45.86■■■■■ 4.93
PGAP1-204ENST00000409475 CCDC180Q9P1Z9 1646 aa40.37■■■■■ 4.05
PGAP1-204ENST00000409475 ZCCHC6Q5VYS8 1495 aaKnown RBP38.44■■■■□ 3.74
PGAP1-204ENST00000409475 ABCC9O60706 1549 aa38.36■■■■□ 3.73
PGAP1-204ENST00000409475 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
PGAP1-204ENST00000409475 MYO15BQ96JP2 1530 aa37.83■■■■□ 3.65
PGAP1-204ENST00000409475 DCAF8L2P0C7V8 631 aa37.72■■■■□ 3.63
PGAP1-204ENST00000409475 NACADO15069 1562 aa37.67■■■■□ 3.62
PGAP1-204ENST00000409475 RB1CC1Q8TDY2 1594 aa37.44■■■■□ 3.58
PGAP1-204ENST00000409475 SCRIBQ14160 1630 aa36.84■■■■□ 3.49
PGAP1-204ENST00000409475 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.47
PGAP1-204ENST00000409475 UNC13AQ9UPW8 1703 aa36.64■■■■□ 3.46
PGAP1-204ENST00000409475 BICRAQ9NZM4 1560 aa36.28■■■■□ 3.4
PGAP1-204ENST00000409475 PABPN1Q86U42 306 aaKnown RBP eCLIP35.98■■■■□ 3.35
PGAP1-204ENST00000409475 CECR2Q9BXF3 1484 aa35.56■■■■□ 3.28
PGAP1-204ENST00000409475 BAZ1AQ9NRL2 1556 aaPredicted RBP35.48■■■■□ 3.27
PGAP1-204ENST00000409475 SMARCA4P51532 1647 aa35.37■■■■□ 3.25
PGAP1-204ENST00000409475 MROH2BQ7Z745 1585 aa35.34■■■■□ 3.25
PGAP1-204ENST00000409475 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
PGAP1-204ENST00000409475 EIF4G1Q04637 1599 aaKnown RBP35.22■■■■□ 3.23
PGAP1-204ENST00000409475 SUPT5HO00267 1087 aaKnown RBP35.12■■■■□ 3.21
PGAP1-204ENST00000409475 PEG3Q9GZU2 1588 aa35.05■■■■□ 3.2
PGAP1-204ENST00000409475 WIZO95785 1651 aa35.03■■■■□ 3.2
PGAP1-204ENST00000409475 SMARCA2P51531 1590 aa34.92■■■■□ 3.18
PGAP1-204ENST00000409475 ATAD2BQ9ULI0 1458 aa34.89■■■■□ 3.18
PGAP1-204ENST00000409475 CC2D2AQ9P2K1 1620 aa34.8■■■■□ 3.16
PGAP1-204ENST00000409475 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
PGAP1-204ENST00000409475 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
PGAP1-204ENST00000409475 HMGXB3Q12766 1538 aa34.68■■■■□ 3.14
PGAP1-204ENST00000409475 BAZ1BQ9UIG0 1483 aaKnown RBP34.65■■■■□ 3.14
PGAP1-204ENST00000409475 CCDC88BA6NC98 1476 aa34.3■■■■□ 3.08
PGAP1-204ENST00000409475 DNAJC5BQ9UF47 199 aa34.21■■■■□ 3.07
PGAP1-204ENST00000409475 CFTRP13569 1480 aa33.79■■■■□ 3
PGAP1-204ENST00000409475 CADPSQ9ULU8 1353 aa33.74■■■□□ 2.99
PGAP1-204ENST00000409475 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
PGAP1-204ENST00000409475 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
PGAP1-204ENST00000409475 NESP48681 1621 aa33.52■■■□□ 2.96
PGAP1-204ENST00000409475 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
PGAP1-204ENST00000409475 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
PGAP1-204ENST00000409475 PDS5BQ9NTI5 1447 aa33.35■■■□□ 2.93
PGAP1-204ENST00000409475 ABCC8Q09428 1581 aa33.35■■■□□ 2.93
PGAP1-204ENST00000409475 WRNQ14191 1432 aaPredicted RBP eCLIP33.26■■■□□ 2.92
PGAP1-204ENST00000409475 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
PGAP1-204ENST00000409475 KIF21AQ7Z4S6 1674 aa33.22■■■□□ 2.91
PGAP1-204ENST00000409475 SYNJ1O43426 1573 aa33.15■■■□□ 2.9
PGAP1-204ENST00000409475 TRIM41Q8WV44 630 aa33.15■■■□□ 2.9
PGAP1-204ENST00000409475 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
PGAP1-204ENST00000409475 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
PGAP1-204ENST00000409475 CUX1P39880 1505 aa33.1■■■□□ 2.89
PGAP1-204ENST00000409475 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
PGAP1-204ENST00000409475 ERCC6Q03468 1493 aa32.98■■■□□ 2.87
PGAP1-204ENST00000409475 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
PGAP1-204ENST00000409475 MRC2Q9UBG0 1479 aa32.97■■■□□ 2.87
PGAP1-204ENST00000409475 TOPBP1Q92547 1522 aa32.96■■■□□ 2.87
PGAP1-204ENST00000409475 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
PGAP1-204ENST00000409475 WDR62O43379 1518 aa32.85■■■□□ 2.85
PGAP1-204ENST00000409475 FGD5Q6ZNL6 1462 aa32.81■■■□□ 2.84
PGAP1-204ENST00000409475 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
PGAP1-204ENST00000409475 EEA1Q15075 1411 aa32.61■■■□□ 2.81
PGAP1-204ENST00000409475 SOGA1O94964 1423 aa32.61■■■□□ 2.81
PGAP1-204ENST00000409475 ABCA10Q8WWZ4 1543 aa32.57■■■□□ 2.8
PGAP1-204ENST00000409475 WDR97A6NE52 1622 aa32.57■■■□□ 2.8
PGAP1-204ENST00000409475 RAD54L2Q9Y4B4 1467 aa32.56■■■□□ 2.8
PGAP1-204ENST00000409475 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
PGAP1-204ENST00000409475 CUX2O14529 1486 aa32.55■■■□□ 2.8
PGAP1-204ENST00000409475 IFT140Q96RY7 1462 aa32.5■■■□□ 2.79
PGAP1-204ENST00000409475 RUSC2Q8N2Y8 1516 aa32.49■■■□□ 2.79
PGAP1-204ENST00000409475 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
PGAP1-204ENST00000409475 FAM9AQ8IZU1 332 aaPredicted RBP32.39■■■□□ 2.78
PGAP1-204ENST00000409475 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
PGAP1-204ENST00000409475 CSRNP3Q8WYN3 585 aa32.34■■■□□ 2.77
PGAP1-204ENST00000409475 GAPVD1Q14C86 1478 aa32.26■■■□□ 2.75
PGAP1-204ENST00000409475 TDRD9Q8NDG6 1382 aaKnown RBP32.26■■■□□ 2.75
PGAP1-204ENST00000409475 ZNF608Q9ULD9 1512 aaPredicted RBP32.22■■■□□ 2.75
PGAP1-204ENST00000409475 IGF1RP08069 1367 aa32.22■■■□□ 2.75
PGAP1-204ENST00000409475 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
PGAP1-204ENST00000409475 KIF21BO75037 1637 aa32.21■■■□□ 2.75
PGAP1-204ENST00000409475 EIF4G3O43432 1585 aaKnown RBP32.19■■■□□ 2.74
PGAP1-204ENST00000409475 PBRM1Q86U86 1689 aa32.19■■■□□ 2.74
PGAP1-204ENST00000409475 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.74
PGAP1-204ENST00000409475 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
PGAP1-204ENST00000409475 CUL7Q14999 1698 aa32.15■■■□□ 2.74
PGAP1-204ENST00000409475 GRIN2BQ13224 1484 aa32.12■■■□□ 2.73
PGAP1-204ENST00000409475 GOLGA3Q08378 1498 aa32.07■■■□□ 2.72
PGAP1-204ENST00000409475 CARMIL1Q5VZK9 1371 aa32.04■■■□□ 2.72
PGAP1-204ENST00000409475 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
PGAP1-204ENST00000409475 RAPGEF2Q9Y4G8 1499 aa32■■■□□ 2.71
PGAP1-204ENST00000409475 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
PGAP1-204ENST00000409475 MAGI1Q96QZ7 1491 aaPredicted RBP31.95■■■□□ 2.7
PGAP1-204ENST00000409475 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
PGAP1-204ENST00000409475 SNAPC4Q5SXM2 1469 aa31.92■■■□□ 2.7
PGAP1-204ENST00000409475 TNIKQ9UKE5 1360 aa31.86■■■□□ 2.69
PGAP1-204ENST00000409475 EHMT2Q96KQ7 1210 aa31.84■■■□□ 2.69
PGAP1-204ENST00000409475 UBTFP17480 764 aaKnown RBP31.79■■■□□ 2.68
PGAP1-204ENST00000409475 SYNJ2O15056 1496 aa31.79■■■□□ 2.68
PGAP1-204ENST00000409475 GRIN2AQ12879 1464 aa31.71■■■□□ 2.67
PGAP1-204ENST00000409475 CTTNBP2Q8WZ74 1663 aa31.7■■■□□ 2.66
PGAP1-204ENST00000409475 CHMP7Q8WUX9 453 aaPredicted RBP31.62■■■□□ 2.65
PGAP1-204ENST00000409475 CEP162Q5TB80 1403 aa31.6■■■□□ 2.65
PGAP1-204ENST00000409475 CHD1O14646 1710 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms