Protein–RNA interactions for Protein: O75920

SERF1A, Small EDRK-rich factor 1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1AO75920 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SERF1AO75920 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.6□□□□□ -0.23
SERF1AO75920 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SERF1AO75920 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.6□□□□□ -0.23
SERF1AO75920 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SERF1AO75920 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.6□□□□□ -0.23
SERF1AO75920 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SERF1AO75920 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SERF1AO75920 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.6□□□□□ -0.23
SERF1AO75920 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SERF1AO75920 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SERF1AO75920 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SERF1AO75920 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.59□□□□□ -0.23
SERF1AO75920 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.59□□□□□ -0.23
SERF1AO75920 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.59□□□□□ -0.23
SERF1AO75920 BX842568.3-201ENST00000418104 571 ntBASIC13.59□□□□□ -0.23
SERF1AO75920 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.59□□□□□ -0.23
SERF1AO75920 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.59□□□□□ -0.23
SERF1AO75920 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.59□□□□□ -0.23
SERF1AO75920 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.59□□□□□ -0.23
SERF1AO75920 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.59□□□□□ -0.23
SERF1AO75920 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 CYP21A1P-202ENST00000354927 1481 ntBASIC13.59□□□□□ -0.23
SERF1AO75920 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.59□□□□□ -0.23
SERF1AO75920 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.59□□□□□ -0.23
SERF1AO75920 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SERF1AO75920 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SERF1AO75920 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SERF1AO75920 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.58□□□□□ -0.23
SERF1AO75920 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SERF1AO75920 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.58□□□□□ -0.23
SERF1AO75920 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SERF1AO75920 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SERF1AO75920 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SERF1AO75920 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SERF1AO75920 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.58□□□□□ -0.23
SERF1AO75920 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SERF1AO75920 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.58□□□□□ -0.24
SERF1AO75920 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SERF1AO75920 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.58□□□□□ -0.24
SERF1AO75920 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.58□□□□□ -0.24
SERF1AO75920 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.58□□□□□ -0.24
SERF1AO75920 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.58□□□□□ -0.24
SERF1AO75920 AC126544.1-201ENST00000580842 1059 ntBASIC13.58□□□□□ -0.24
SERF1AO75920 AL356740.2-201ENST00000601559 647 ntBASIC13.58□□□□□ -0.24
SERF1AO75920 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SERF1AO75920 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
SERF1AO75920 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 AC023824.1-201ENST00000562945 2975 ntBASIC13.58□□□□□ -0.24
SERF1AO75920 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SERF1AO75920 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.58□□□□□ -0.24
SERF1AO75920 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SERF1AO75920 AC116351.2-201ENST00000606540 1585 ntBASIC13.58□□□□□ -0.24
SERF1AO75920 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.58□□□□□ -0.24
SERF1AO75920 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.58□□□□□ -0.24
SERF1AO75920 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SERF1AO75920 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SERF1AO75920 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SERF1AO75920 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SERF1AO75920 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms