Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
RAB5BP61020 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB5BP61020 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 HSD17B1P1-201ENST00000590052 955 ntBASIC14.45□□□□□ -0.1
RAB5BP61020 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB5BP61020 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5BP61020 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB5BP61020 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB5BP61020 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB5BP61020 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 LINC02228-204ENST00000642115 2962 ntBASIC14.44□□□□□ -0.1
RAB5BP61020 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 KRT8P36-201ENST00000489121 1440 ntBASIC14.44□□□□□ -0.1
RAB5BP61020 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB5BP61020 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RAB5BP61020 MIR4508-201ENST00000584178 70 ntBASIC14.44□□□□□ -0.1
RAB5BP61020 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB5BP61020 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5BP61020 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 AC021242.3-201ENST00000607598 1377 ntBASIC14.44□□□□□ -0.1
RAB5BP61020 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5BP61020 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5BP61020 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5BP61020 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RAB5BP61020 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5BP61020 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5BP61020 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5BP61020 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5BP61020 AC067930.6-201ENST00000623257 4947 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms