Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.17■■□□□ 1.94
CDH23Q9H251 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDH23Q9H251 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDH23Q9H251 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.16■■□□□ 1.94
CDH23Q9H251 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CDH23Q9H251 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDH23Q9H251 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.15■■□□□ 1.94
CDH23Q9H251 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDH23Q9H251 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.14■■□□□ 1.94
CDH23Q9H251 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.14■■□□□ 1.94
CDH23Q9H251 AC126177.7-201ENST00000547904 679 ntBASIC27.14■■□□□ 1.94
CDH23Q9H251 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
CDH23Q9H251 MIR6765-201ENST00000614092 87 ntBASIC27.14■■□□□ 1.93
CDH23Q9H251 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.13■■□□□ 1.93
CDH23Q9H251 MIR638-201ENST00000385237 100 ntBASIC27.13■■□□□ 1.93
CDH23Q9H251 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.13■■□□□ 1.93
CDH23Q9H251 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDH23Q9H251 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDH23Q9H251 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.12■■□□□ 1.93
CDH23Q9H251 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDH23Q9H251 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.12■■□□□ 1.93
CDH23Q9H251 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.11■■□□□ 1.93
CDH23Q9H251 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
CDH23Q9H251 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDH23Q9H251 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.1■■□□□ 1.93
CDH23Q9H251 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDH23Q9H251 MIR4508-201ENST00000584178 70 ntBASIC27.1■■□□□ 1.93
CDH23Q9H251 RAP2CP1-202ENST00000605179 643 ntBASIC27.1■■□□□ 1.93
CDH23Q9H251 PVT1_1.1-201ENST00000615125 194 ntBASIC27.1■■□□□ 1.93
CDH23Q9H251 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CDH23Q9H251 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDH23Q9H251 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDH23Q9H251 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.09■■□□□ 1.93
CDH23Q9H251 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.09■■□□□ 1.93
CDH23Q9H251 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDH23Q9H251 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDH23Q9H251 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDH23Q9H251 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDH23Q9H251 BHLHE23-202ENST00000612929 1109 ntBASIC27.08■■□□□ 1.93
CDH23Q9H251 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CDH23Q9H251 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDH23Q9H251 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.08■■□□□ 1.92
CDH23Q9H251 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CDH23Q9H251 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.07■■□□□ 1.92
CDH23Q9H251 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.06■■□□□ 1.92
CDH23Q9H251 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.06■■□□□ 1.92
CDH23Q9H251 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
CDH23Q9H251 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.05■■□□□ 1.92
CDH23Q9H251 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
CDH23Q9H251 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.04■■□□□ 1.92
CDH23Q9H251 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.03■■□□□ 1.92
CDH23Q9H251 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDH23Q9H251 YBX1P4-201ENST00000392794 808 ntBASIC27.03■■□□□ 1.92
CDH23Q9H251 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDH23Q9H251 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.02■■□□□ 1.92
CDH23Q9H251 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.02■■□□□ 1.92
CDH23Q9H251 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CDH23Q9H251 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CDH23Q9H251 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.01■■□□□ 1.92
CDH23Q9H251 AC239859.2-201ENST00000444165 318 ntBASIC27.01■■□□□ 1.91
CDH23Q9H251 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDH23Q9H251 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDH23Q9H251 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDH23Q9H251 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27■■□□□ 1.91
CDH23Q9H251 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CDH23Q9H251 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27■■□□□ 1.91
CDH23Q9H251 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.99■■□□□ 1.91
CDH23Q9H251 AC008406.3-201ENST00000620001 1374 ntBASIC26.99■■□□□ 1.91
CDH23Q9H251 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CDH23Q9H251 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.98■■□□□ 1.91
CDH23Q9H251 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CDH23Q9H251 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDH23Q9H251 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CDH23Q9H251 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.98■■□□□ 1.91
CDH23Q9H251 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDH23Q9H251 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
CDH23Q9H251 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.97■■□□□ 1.91
CDH23Q9H251 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH23Q9H251 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH23Q9H251 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH23Q9H251 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH23Q9H251 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH23Q9H251 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CDH23Q9H251 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDH23Q9H251 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.96■■□□□ 1.91
CDH23Q9H251 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.96■■□□□ 1.91
CDH23Q9H251 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDH23Q9H251 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.95■■□□□ 1.91
CDH23Q9H251 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.95■■□□□ 1.9
CDH23Q9H251 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDH23Q9H251 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDH23Q9H251 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.94■■□□□ 1.9
CDH23Q9H251 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDH23Q9H251 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDH23Q9H251 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.93■■□□□ 1.9
CDH23Q9H251 AL031848.2-201ENST00000607670 837 ntBASIC26.93■■□□□ 1.9
CDH23Q9H251 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDH23Q9H251 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDH23Q9H251 AC139795.1-202ENST00000500444 432 ntBASIC26.92■■□□□ 1.9
CDH23Q9H251 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms