Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA2Q6UWI4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.54■□□□□ 0.72
SHISA2Q6UWI4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA2Q6UWI4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA2Q6UWI4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SHISA2Q6UWI4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA2Q6UWI4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA2Q6UWI4 GUSBP5-201ENST00000418136 578 ntBASIC19.53■□□□□ 0.72
SHISA2Q6UWI4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA2Q6UWI4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA2Q6UWI4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 MIR6765-201ENST00000614092 87 ntBASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SHISA2Q6UWI4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHISA2Q6UWI4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHISA2Q6UWI4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
SHISA2Q6UWI4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.51■□□□□ 0.71
SHISA2Q6UWI4 AL359258.2-201ENST00000564063 1566 ntBASIC19.51■□□□□ 0.71
SHISA2Q6UWI4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHISA2Q6UWI4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SHISA2Q6UWI4 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.5■□□□□ 0.71
SHISA2Q6UWI4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.5■□□□□ 0.71
SHISA2Q6UWI4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 AC025884.2-201ENST00000553429 711 ntBASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 AC093536.1-201ENST00000569153 554 ntBASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
SHISA2Q6UWI4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.48■□□□□ 0.71
SHISA2Q6UWI4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.48■□□□□ 0.71
SHISA2Q6UWI4 AC018755.3-202ENST00000596210 929 ntBASIC19.48■□□□□ 0.71
SHISA2Q6UWI4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA2Q6UWI4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.47■□□□□ 0.71
SHISA2Q6UWI4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA2Q6UWI4 AC103834.1-201ENST00000520383 144 ntBASIC19.47■□□□□ 0.71
SHISA2Q6UWI4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA2Q6UWI4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 RAP2CP1-202ENST00000605179 643 ntBASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA2Q6UWI4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SHISA2Q6UWI4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 MIR3960-201ENST00000583311 91 ntBASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 MIR4508-201ENST00000584178 70 ntBASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 AL135925.1-201ENST00000605920 1701 ntBASIC19.44■□□□□ 0.7
SHISA2Q6UWI4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 SPCS2P3-201ENST00000500401 656 ntBASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SHISA2Q6UWI4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.42■□□□□ 0.7
SHISA2Q6UWI4 MIR935-201ENST00000401179 91 ntBASIC19.42■□□□□ 0.7
SHISA2Q6UWI4 AL356441.2-201ENST00000443009 864 ntBASIC19.42■□□□□ 0.7
SHISA2Q6UWI4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
SHISA2Q6UWI4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHISA2Q6UWI4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.41■□□□□ 0.7
SHISA2Q6UWI4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.41■□□□□ 0.7
SHISA2Q6UWI4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms