Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRK2Q5S007 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRK2Q5S007 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRK2Q5S007 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LRRK2Q5S007 AL031848.2-201ENST00000607670 837 ntBASIC22.3■■□□□ 1.16
LRRK2Q5S007 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRK2Q5S007 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRK2Q5S007 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.3■■□□□ 1.16
LRRK2Q5S007 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 PVT1_1.1-201ENST00000615125 194 ntBASIC22.29■■□□□ 1.16
LRRK2Q5S007 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.29■■□□□ 1.16
LRRK2Q5S007 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
LRRK2Q5S007 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.29■■□□□ 1.16
LRRK2Q5S007 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRK2Q5S007 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRK2Q5S007 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRK2Q5S007 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRK2Q5S007 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRK2Q5S007 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.26■■□□□ 1.15
LRRK2Q5S007 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
LRRK2Q5S007 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRK2Q5S007 AL161658.1-201ENST00000623641 1967 ntBASIC22.25■■□□□ 1.15
LRRK2Q5S007 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LRRK2Q5S007 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LRRK2Q5S007 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.25■■□□□ 1.15
LRRK2Q5S007 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LRRK2Q5S007 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRK2Q5S007 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LRRK2Q5S007 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
LRRK2Q5S007 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LRRK2Q5S007 AC120057.4-201ENST00000624722 1615 ntBASIC22.23■■□□□ 1.15
LRRK2Q5S007 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
LRRK2Q5S007 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LRRK2Q5S007 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LRRK2Q5S007 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
LRRK2Q5S007 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
LRRK2Q5S007 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.21■■□□□ 1.15
LRRK2Q5S007 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
LRRK2Q5S007 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRK2Q5S007 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LRRK2Q5S007 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
LRRK2Q5S007 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.2■■□□□ 1.14
LRRK2Q5S007 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRK2Q5S007 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRK2Q5S007 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LRRK2Q5S007 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.2■■□□□ 1.14
LRRK2Q5S007 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LRRK2Q5S007 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LRRK2Q5S007 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.19■■□□□ 1.14
LRRK2Q5S007 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
LRRK2Q5S007 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LRRK2Q5S007 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRK2Q5S007 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.18■■□□□ 1.14
LRRK2Q5S007 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LRRK2Q5S007 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LRRK2Q5S007 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRK2Q5S007 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
LRRK2Q5S007 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
LRRK2Q5S007 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LRRK2Q5S007 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LRRK2Q5S007 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.16■■□□□ 1.14
LRRK2Q5S007 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LRRK2Q5S007 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.15■■□□□ 1.14
LRRK2Q5S007 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LRRK2Q5S007 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.14■■□□□ 1.14
LRRK2Q5S007 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LRRK2Q5S007 AL359258.2-201ENST00000564063 1566 ntBASIC22.13■■□□□ 1.13
LRRK2Q5S007 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LRRK2Q5S007 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.13■■□□□ 1.13
LRRK2Q5S007 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.12■■□□□ 1.13
LRRK2Q5S007 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LRRK2Q5S007 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.12■■□□□ 1.13
LRRK2Q5S007 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.11■■□□□ 1.13
LRRK2Q5S007 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRRK2Q5S007 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms