Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RNF126P1-201ENST00000567452 1320 ntBASIC21.57■■□□□ 1.04
CHRFAM7AQ494W8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRFAM7AQ494W8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRFAM7AQ494W8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHRFAM7AQ494W8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.57■■□□□ 1.04
CHRFAM7AQ494W8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.56■■□□□ 1.04
CHRFAM7AQ494W8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRFAM7AQ494W8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.56■■□□□ 1.04
CHRFAM7AQ494W8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHRFAM7AQ494W8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.55■■□□□ 1.04
CHRFAM7AQ494W8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRFAM7AQ494W8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRFAM7AQ494W8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRFAM7AQ494W8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHRFAM7AQ494W8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRFAM7AQ494W8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CHRFAM7AQ494W8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRFAM7AQ494W8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRFAM7AQ494W8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.53■■□□□ 1.04
CHRFAM7AQ494W8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHRFAM7AQ494W8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CHRFAM7AQ494W8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CHRFAM7AQ494W8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRFAM7AQ494W8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRFAM7AQ494W8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CHRFAM7AQ494W8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CHRFAM7AQ494W8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CHRFAM7AQ494W8 LINC01003-201ENST00000564834 1764 ntBASIC21.5■■□□□ 1.03
CHRFAM7AQ494W8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CHRFAM7AQ494W8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRFAM7AQ494W8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHRFAM7AQ494W8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CHRFAM7AQ494W8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRFAM7AQ494W8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRFAM7AQ494W8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRFAM7AQ494W8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHRFAM7AQ494W8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 AC012354.3-201ENST00000623734 483 ntBASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHRFAM7AQ494W8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHRFAM7AQ494W8 AC127502.1-201ENST00000399971 1502 ntBASIC21.46■■□□□ 1.03
CHRFAM7AQ494W8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.46■■□□□ 1.03
CHRFAM7AQ494W8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHRFAM7AQ494W8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CHRFAM7AQ494W8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHRFAM7AQ494W8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CHRFAM7AQ494W8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHRFAM7AQ494W8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 NTF6A-201ENST00000591175 560 ntBASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHRFAM7AQ494W8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CHRFAM7AQ494W8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRFAM7AQ494W8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHRFAM7AQ494W8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CHRFAM7AQ494W8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CHRFAM7AQ494W8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CHRFAM7AQ494W8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms