Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL1P22362 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.52■■□□□ 1.04
CCL1P22362 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL1P22362 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL1P22362 AP004609.3-201ENST00000610705 1884 ntBASIC21.52■■□□□ 1.03
CCL1P22362 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCL1P22362 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.51■■□□□ 1.03
CCL1P22362 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.51■■□□□ 1.03
CCL1P22362 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.51■■□□□ 1.03
CCL1P22362 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.51■■□□□ 1.03
CCL1P22362 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL1P22362 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL1P22362 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL1P22362 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL1P22362 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL1P22362 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCL1P22362 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.49■■□□□ 1.03
CCL1P22362 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL1P22362 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
CCL1P22362 WHAMMP3-201ENST00000611636 1609 ntBASIC21.48■■□□□ 1.03
CCL1P22362 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL1P22362 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.48■■□□□ 1.03
CCL1P22362 AC145676.1-201ENST00000514988 2004 ntBASIC21.48■■□□□ 1.03
CCL1P22362 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCL1P22362 AC142472.1-201ENST00000612013 1741 ntBASIC21.47■■□□□ 1.03
CCL1P22362 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCL1P22362 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCL1P22362 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCL1P22362 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCL1P22362 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.46■■□□□ 1.03
CCL1P22362 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.46■■□□□ 1.03
CCL1P22362 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCL1P22362 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCL1P22362 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCL1P22362 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCL1P22362 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.45■■□□□ 1.02
CCL1P22362 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCL1P22362 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCL1P22362 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCL1P22362 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCL1P22362 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.44■■□□□ 1.02
CCL1P22362 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.44■■□□□ 1.02
CCL1P22362 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCL1P22362 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.43■■□□□ 1.02
CCL1P22362 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.43■■□□□ 1.02
CCL1P22362 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCL1P22362 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCL1P22362 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.42■■□□□ 1.02
CCL1P22362 LINC01971-201ENST00000617888 1048 ntBASIC21.42■■□□□ 1.02
CCL1P22362 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCL1P22362 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCL1P22362 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.41■■□□□ 1.02
CCL1P22362 DUSP8P4-201ENST00000399538 1761 ntBASIC21.41■■□□□ 1.02
CCL1P22362 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCL1P22362 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.4■■□□□ 1.02
CCL1P22362 AC092803.2-201ENST00000564287 1899 ntBASIC21.4■■□□□ 1.02
CCL1P22362 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCL1P22362 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCL1P22362 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCL1P22362 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCL1P22362 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCL1P22362 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCL1P22362 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCL1P22362 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.38■■□□□ 1.01
CCL1P22362 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.38■■□□□ 1.01
CCL1P22362 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCL1P22362 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCL1P22362 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCL1P22362 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCL1P22362 RPS2P35-201ENST00000443417 897 ntBASIC21.37■■□□□ 1.01
CCL1P22362 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CCL1P22362 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCL1P22362 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCL1P22362 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.36■■□□□ 1.01
CCL1P22362 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.36■■□□□ 1.01
CCL1P22362 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCL1P22362 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCL1P22362 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCL1P22362 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCL1P22362 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCL1P22362 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCL1P22362 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L13-201ENST00000554103 1267 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L15-201ENST00000611059 1267 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L23-201ENST00000615195 1269 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L24-201ENST00000617576 1269 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L22-201ENST00000618238 1269 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L20-201ENST00000619712 1269 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L21-201ENST00000622058 1269 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L10-201ENST00000622460 1267 ntBASIC21.35■■□□□ 1.01
CCL1P22362 DUX4L25-201ENST00000624915 1269 ntBASIC21.35■■□□□ 1.01
CCL1P22362 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.35■■□□□ 1.01
CCL1P22362 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCL1P22362 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms