Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.35■□□□□ 0.69
CSN3P07498 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSN3P07498 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.34■□□□□ 0.69
CSN3P07498 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSN3P07498 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSN3P07498 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSN3P07498 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSN3P07498 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSN3P07498 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CSN3P07498 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CSN3P07498 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.32■□□□□ 0.68
CSN3P07498 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.32■□□□□ 0.68
CSN3P07498 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSN3P07498 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSN3P07498 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSN3P07498 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSN3P07498 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.31■□□□□ 0.68
CSN3P07498 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSN3P07498 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSN3P07498 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CSN3P07498 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSN3P07498 AC008813.1-201ENST00000536597 885 ntBASIC19.3■□□□□ 0.68
CSN3P07498 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSN3P07498 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSN3P07498 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.3■□□□□ 0.68
CSN3P07498 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.3■□□□□ 0.68
CSN3P07498 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSN3P07498 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CSN3P07498 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSN3P07498 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.29■□□□□ 0.68
CSN3P07498 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSN3P07498 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.29■□□□□ 0.68
CSN3P07498 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CSN3P07498 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.28■□□□□ 0.68
CSN3P07498 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSN3P07498 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSN3P07498 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSN3P07498 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSN3P07498 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSN3P07498 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSN3P07498 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSN3P07498 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSN3P07498 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.27■□□□□ 0.68
CSN3P07498 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.26■□□□□ 0.67
CSN3P07498 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSN3P07498 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSN3P07498 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CSN3P07498 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
CSN3P07498 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.26■□□□□ 0.67
CSN3P07498 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.26■□□□□ 0.67
CSN3P07498 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CSN3P07498 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSN3P07498 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSN3P07498 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CSN3P07498 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSN3P07498 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSN3P07498 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSN3P07498 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSN3P07498 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CSN3P07498 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.24■□□□□ 0.67
CSN3P07498 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.23■□□□□ 0.67
CSN3P07498 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSN3P07498 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSN3P07498 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.23■□□□□ 0.67
CSN3P07498 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.23■□□□□ 0.67
CSN3P07498 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSN3P07498 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CSN3P07498 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSN3P07498 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CSN3P07498 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSN3P07498 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CSN3P07498 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.2■□□□□ 0.66
CSN3P07498 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.2■□□□□ 0.66
CSN3P07498 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CSN3P07498 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CSN3P07498 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CSN3P07498 AP002414.2-202ENST00000590929 1450 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms