Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDGFBP01127 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDGFBP01127 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PDGFBP01127 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.75■■□□□ 1.71
PDGFBP01127 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.75■■□□□ 1.71
PDGFBP01127 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.75■■□□□ 1.71
PDGFBP01127 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDGFBP01127 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PDGFBP01127 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDGFBP01127 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDGFBP01127 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
PDGFBP01127 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PDGFBP01127 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
PDGFBP01127 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDGFBP01127 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDGFBP01127 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDGFBP01127 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDGFBP01127 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.72■■□□□ 1.71
PDGFBP01127 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDGFBP01127 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.71■■□□□ 1.71
PDGFBP01127 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.71■■□□□ 1.71
PDGFBP01127 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDGFBP01127 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
PDGFBP01127 AC093536.1-201ENST00000569153 554 ntBASIC25.7■■□□□ 1.7
PDGFBP01127 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDGFBP01127 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.69■■□□□ 1.7
PDGFBP01127 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDGFBP01127 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDGFBP01127 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDGFBP01127 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.69■■□□□ 1.7
PDGFBP01127 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.69■■□□□ 1.7
PDGFBP01127 RAP2CP1-202ENST00000605179 643 ntBASIC25.69■■□□□ 1.7
PDGFBP01127 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PDGFBP01127 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.69■■□□□ 1.7
PDGFBP01127 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDGFBP01127 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDGFBP01127 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.68■■□□□ 1.7
PDGFBP01127 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PDGFBP01127 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
PDGFBP01127 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.68■■□□□ 1.7
PDGFBP01127 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.68■■□□□ 1.7
PDGFBP01127 AL359258.2-201ENST00000564063 1566 ntBASIC25.68■■□□□ 1.7
PDGFBP01127 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFBP01127 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFBP01127 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFBP01127 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFBP01127 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.67■■□□□ 1.7
PDGFBP01127 AC025884.2-201ENST00000553429 711 ntBASIC25.67■■□□□ 1.7
PDGFBP01127 MIR6765-201ENST00000614092 87 ntBASIC25.67■■□□□ 1.7
PDGFBP01127 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.66■■□□□ 1.7
PDGFBP01127 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.66■■□□□ 1.7
PDGFBP01127 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDGFBP01127 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.65■■□□□ 1.7
PDGFBP01127 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDGFBP01127 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDGFBP01127 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PDGFBP01127 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.64■■□□□ 1.7
PDGFBP01127 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.64■■□□□ 1.7
PDGFBP01127 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFBP01127 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.63■■□□□ 1.69
PDGFBP01127 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFBP01127 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PDGFBP01127 MIR4508-201ENST00000584178 70 ntBASIC25.63■■□□□ 1.69
PDGFBP01127 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.63■■□□□ 1.69
PDGFBP01127 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PDGFBP01127 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.63■■□□□ 1.69
PDGFBP01127 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFBP01127 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFBP01127 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDGFBP01127 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.62■■□□□ 1.69
PDGFBP01127 AC103724.3-201ENST00000564481 992 ntBASIC25.62■■□□□ 1.69
PDGFBP01127 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PDGFBP01127 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.61■■□□□ 1.69
PDGFBP01127 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDGFBP01127 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.61■■□□□ 1.69
PDGFBP01127 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.61■■□□□ 1.69
PDGFBP01127 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDGFBP01127 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
PDGFBP01127 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDGFBP01127 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.6■■□□□ 1.69
PDGFBP01127 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PDGFBP01127 AC008406.3-201ENST00000620001 1374 ntBASIC25.59■■□□□ 1.69
PDGFBP01127 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDGFBP01127 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.59■■□□□ 1.69
PDGFBP01127 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDGFBP01127 AL031848.2-201ENST00000607670 837 ntBASIC25.59■■□□□ 1.69
PDGFBP01127 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
PDGFBP01127 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.58■■□□□ 1.68
PDGFBP01127 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.57■■□□□ 1.68
PDGFBP01127 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PDGFBP01127 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDGFBP01127 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.56■■□□□ 1.68
PDGFBP01127 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.56■■□□□ 1.68
PDGFBP01127 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.55■■□□□ 1.68
PDGFBP01127 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFBP01127 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.54■■□□□ 1.68
PDGFBP01127 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFBP01127 AC239859.2-201ENST00000444165 318 ntBASIC25.54■■□□□ 1.68
PDGFBP01127 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFBP01127 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms