Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 TCF25-204ENST00000561958 763 ntTSL 326.77■■□□□ 1.884e-6■■□□□ 12.9
DROSHAQ9NRR4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC24.91■■□□□ 1.587e-15■■□□□ 12.9
DROSHAQ9NRR4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC23.53■■□□□ 1.367e-15■■□□□ 12.9
DROSHAQ9NRR4 MDM2-219ENST00000493419 577 ntTSL 221.83■■□□□ 1.087e-15■■□□□ 12.9
DROSHAQ9NRR4 MDM2-204ENST00000311420 1583 ntTSL 516.99■□□□□ 0.317e-15■■□□□ 12.9
DROSHAQ9NRR4 MDM2-213ENST00000393417 1683 ntTSL 512.05□□□□□ -0.487e-15■■□□□ 12.9
DROSHAQ9NRR4 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.837e-15■■□□□ 12.9
DROSHAQ9NRR4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.547e-15■■□□□ 12.9
DROSHAQ9NRR4 COPE-204ENST00000593827 601 ntTSL 330.69■■■□□ 2.52e-7■■□□□ 12.9
DROSHAQ9NRR4 COPE-203ENST00000351079 907 ntTSL 2 BASIC28.95■■■□□ 2.222e-7■■□□□ 12.9
DROSHAQ9NRR4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.092e-7■■□□□ 12.9
DROSHAQ9NRR4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC26.5■■□□□ 1.832e-7■■□□□ 12.9
DROSHAQ9NRR4 COPE-202ENST00000349893 948 ntTSL 2 BASIC25.55■■□□□ 1.682e-7■■□□□ 12.9
DROSHAQ9NRR4 XPO6-216ENST00000569951 262 ntTSL 516.77■□□□□ 0.275e-8■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-221ENST00000522361 367 ntTSL 428.98■■■□□ 2.233e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-209ENST00000518879 820 ntTSL 528.88■■■□□ 2.213e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-205ENST00000518167 421 ntTSL 528.76■■■□□ 2.23e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-219ENST00000521223 587 ntTSL 428.71■■■□□ 2.193e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.643e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-210ENST00000519020 573 ntTSL 524.66■■□□□ 1.543e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.373e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-206ENST00000518283 574 ntTSL 413.73□□□□□ -0.213e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.673e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-228ENST00000523993 581 ntTSL 39.33□□□□□ -0.923e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.363e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-225ENST00000523288 4552 ntTSL 25.07□□□□□ -1.63e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM49B-222ENST00000522702 544 ntTSL 43.87□□□□□ -1.793e-6■■□□□ 12.9
DROSHAQ9NRR4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC24.16■■□□□ 1.461e-6■■□□□ 12.9
DROSHAQ9NRR4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.321e-6■■□□□ 12.9
DROSHAQ9NRR4 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC19.31■□□□□ 0.681e-6■■□□□ 12.9
DROSHAQ9NRR4 STXBP2-205ENST00000593854 704 ntTSL 228.33■■■□□ 2.133e-23■■□□□ 12.9
DROSHAQ9NRR4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.049e-9■■□□□ 12.9
DROSHAQ9NRR4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.152e-6■■□□□ 12.9
DROSHAQ9NRR4 HNRNPL-211ENST00000601047 1127 ntTSL 526.1■■□□□ 1.772e-6■■□□□ 12.9
DROSHAQ9NRR4 HNRNPL-212ENST00000601449 1918 ntTSL 525.55■■□□□ 1.682e-6■■□□□ 12.9
DROSHAQ9NRR4 HNRNPL-207ENST00000598985 900 ntTSL 521.83■■□□□ 1.082e-6■■□□□ 12.9
DROSHAQ9NRR4 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC20.58■□□□□ 0.882e-6■■□□□ 12.9
DROSHAQ9NRR4 HNRNPL-202ENST00000388749 1952 ntTSL 515.62■□□□□ 0.092e-6■■□□□ 12.9
DROSHAQ9NRR4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.11e-6■■□□□ 12.9
DROSHAQ9NRR4 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.453e-8■■□□□ 12.9
DROSHAQ9NRR4 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.463e-8■■□□□ 12.9
DROSHAQ9NRR4 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.523e-8■■□□□ 12.9
DROSHAQ9NRR4 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC11.04□□□□□ -0.643e-8■■□□□ 12.9
DROSHAQ9NRR4 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.733e-8■■□□□ 12.9
DROSHAQ9NRR4 NDUFA11-203ENST00000591160 604 ntTSL 330.4■■■□□ 2.465e-7■■□□□ 12.9
DROSHAQ9NRR4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.765e-7■■□□□ 12.9
DROSHAQ9NRR4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC26.04■■□□□ 1.765e-7■■□□□ 12.9
DROSHAQ9NRR4 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 226.04■■□□□ 1.765e-7■■□□□ 12.9
DROSHAQ9NRR4 AC024592.3-201ENST00000592091 2118 ntTSL 225.55■■□□□ 1.685e-7■■□□□ 12.9
DROSHAQ9NRR4 NDUFA11-206ENST00000593233 657 ntTSL 324.97■■□□□ 1.595e-7■■□□□ 12.9
DROSHAQ9NRR4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC24.79■■□□□ 1.565e-7■■□□□ 12.9
DROSHAQ9NRR4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC22.68■■□□□ 1.225e-7■■□□□ 12.9
DROSHAQ9NRR4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.317e-12■■□□□ 12.9
DROSHAQ9NRR4 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC17.33■□□□□ 0.367e-12■■□□□ 12.9
DROSHAQ9NRR4 SORBS3-202ENST00000517500 1228 ntTSL 232.7■■■□□ 2.833e-6■■□□□ 12.9
DROSHAQ9NRR4 SORBS3-203ENST00000517535 3067 ntTSL 227.93■■■□□ 2.063e-6■■□□□ 12.9
DROSHAQ9NRR4 SORBS3-205ENST00000518512 755 ntTSL 526.75■■□□□ 1.873e-6■■□□□ 12.9
DROSHAQ9NRR4 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.023e-6■■□□□ 12.9
DROSHAQ9NRR4 PTPRK-216ENST00000524481 3157 ntTSL 216.64■□□□□ 0.255e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.255e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC15.47■□□□□ 0.075e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -05e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.195e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.335e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.635e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-219ENST00000531050 2515 ntTSL 1 (best)9.94□□□□□ -0.825e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-210ENST00000415055 782 ntTSL 57.33□□□□□ -1.245e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-209ENST00000415046 1029 ntTSL 56.46□□□□□ -1.375e-6■■□□□ 12.8
DROSHAQ9NRR4 PTPRK-220ENST00000531466 311 ntTSL 53.25□□□□□ -1.895e-6■■□□□ 12.8
DROSHAQ9NRR4 RPS13-203ENST00000525828 664 ntTSL 226.77■■□□□ 1.881e-60■■□□□ 12.8
DROSHAQ9NRR4 RPS13-204ENST00000526895 561 ntTSL 322.29■■□□□ 1.161e-60■■□□□ 12.8
DROSHAQ9NRR4 RPS13-209ENST00000533969 355 ntTSL 321.08■□□□□ 0.961e-60■■□□□ 12.8
DROSHAQ9NRR4 RPS13-201ENST00000228140 491 ntTSL 2 BASIC16.16■□□□□ 0.181e-60■■□□□ 12.8
DROSHAQ9NRR4 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.051e-60■■□□□ 12.8
DROSHAQ9NRR4 RPS13-208ENST00000531908 746 ntTSL 26.42□□□□□ -1.381e-60■■□□□ 12.8
DROSHAQ9NRR4 SNORD14B-201ENST00000364533 90 ntBASIC1.75□□□□□ -2.131e-60■■□□□ 12.8
DROSHAQ9NRR4 B2M-202ENST00000544417 933 ntTSL 5 BASIC18.03■□□□□ 0.482e-13■■□□□ 12.8
DROSHAQ9NRR4 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.182e-13■■□□□ 12.8
DROSHAQ9NRR4 B2M-206ENST00000559720 1220 ntTSL 514.93□□□□□ -0.022e-13■■□□□ 12.8
DROSHAQ9NRR4 B2M-212ENST00000561424 604 ntTSL 314.93□□□□□ -0.022e-13■■□□□ 12.8
DROSHAQ9NRR4 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.312e-13■■□□□ 12.8
DROSHAQ9NRR4 B2M-203ENST00000557901 407 ntTSL 1 (best)12.49□□□□□ -0.412e-13■■□□□ 12.8
DROSHAQ9NRR4 B2M-201ENST00000349264 732 ntTSL 39.46□□□□□ -0.92e-13■■□□□ 12.8
DROSHAQ9NRR4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC42.1■■■■■ 4.336e-12■■□□□ 12.8
DROSHAQ9NRR4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.98■■□□□ 1.592e-10■■□□□ 12.8
DROSHAQ9NRR4 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.72e-10■■□□□ 12.8
DROSHAQ9NRR4 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.154e-7■■□□□ 12.8
DROSHAQ9NRR4 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.264e-7■■□□□ 12.8
DROSHAQ9NRR4 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.354e-7■■□□□ 12.8
DROSHAQ9NRR4 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.44e-7■■□□□ 12.8
DROSHAQ9NRR4 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC17.65■□□□□ 0.425e-6■■□□□ 12.8
DROSHAQ9NRR4 AGO2-209ENST00000523609 3050 ntTSL 1 (best)16.78■□□□□ 0.285e-6■■□□□ 12.8
DROSHAQ9NRR4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.185e-6■■□□□ 12.8
DROSHAQ9NRR4 NEU4-216ENST00000494678 491 ntTSL 429.77■■■□□ 2.362e-8■■□□□ 12.8
DROSHAQ9NRR4 NEU4-213ENST00000435934 451 ntTSL 426.04■■□□□ 1.762e-8■■□□□ 12.8
DROSHAQ9NRR4 AC068152.1-211ENST00000571665 255 ntTSL 445.75■■■■■ 4.913e-6■■□□□ 12.8
DROSHAQ9NRR4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC43.76■■■■■ 4.63e-6■■□□□ 12.8
DROSHAQ9NRR4 PAPD7-206ENST00000515721 603 ntTSL 343.73■■■■■ 4.593e-6■■□□□ 12.8
DROSHAQ9NRR4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC43.56■■■■■ 4.563e-6■■□□□ 12.8
DROSHAQ9NRR4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC42.78■■■■■ 4.443e-6■■□□□ 12.8
Retrieved 100 of 16,331 protein–RNA pairs in 101.8 ms